Evidence map›Paper›PMID 36211387›Full record

ArticleFrontiers in immunology2022

Cilia-related gene signature in the nasal mucosa correlates with disease severity and outcomes in critical respiratory syncytial virus bronchiolitis.

Clarissa M Koch, Andrew D Prigge, Leah Setar, Kishore R Anekalla, Hahn Chi Do-Umehara, Hiam Abdala-Valencia, Yuliya Politanska, Avani Shukla, Jairo Chavez, Grant R Hahn and 1 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 6 citations in OpenAlex.

  1. Unique nasal cell states induced by common pediatric respiratory viruses.bioRxiv : the preprint server for biology · 2026
    Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Clarissa M KochDepartment of Medicine, Northwestern University, Chicago, IL, United States.
Andrew D PriggeDepartment of Pediatrics, Northwestern University, Chicago, IL, United States.
Leah SetarDepartment of Pediatrics, Northwestern University, Chicago, IL, United States.
Kishore R AnekallaDepartment of Medicine, Northwestern University, Chicago, IL, United States.
Hahn Chi Do-UmeharaDepartment of Medicine, Northwestern University, Chicago, IL, United States.
Hiam Abdala-ValenciaDepartment of Medicine, Northwestern University, Chicago, IL, United States.
Yuliya PolitanskaDepartment of Medicine, Northwestern University, Chicago, IL, United States.
Avani ShuklaAnn & Robert H. Lurie Children's Hospital of Chicago, Chicago, IL, United States.
Jairo ChavezAnn & Robert H. Lurie Children's Hospital of Chicago, Chicago, IL, United States.
Grant R HahnDepartment of Pediatrics, Northwestern University, Chicago, IL, United States.
Bria M CoatesDepartment of Pediatrics, Northwestern University, Chicago, IL, United States.
Northwestern University · USLurie Children's Hospital · US

Funding

Northwestern University Clinical and Translational Science Institute (NUCATS)UL1TR001422 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI D'AQUILA, RICHARD · 2015 to 2023
$56.8M
The Cell Phenotyping and Mouse CoreP01HL154998 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KAREN M RIDGE · 2021 to 2026
$18.9M
Training Program In Lung SciencesT32HL076139 · NHLBI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI KAREN M RIDGE, Jacob I Sznajder · 2004 to 2026
$9.6M
Pathophysiology of Influenza A Virus-induced Lung Injury in JuvenilesK08HL143127 · NHLBI · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI COATES, BRIA M · 2018 to 2021
$647k
NCATS NIH HHS UL1 TR001422NHLBI NIH HHS K08 HL143127NHLBI NIH HHS P01 HL154998NHLBI NIH HHS T32 HL076139
6 · The paper itself

Abstract

Background: Respiratory syncytial virus (RSV) can cause life-threatening respiratory failure in infants. We sought to characterize the local host response to RSV infection in the nasal mucosa of infants with critical bronchiolitis and to identify early admission gene signatures associated with clinical outcomes. Methods: Nasal scrape biopsies were obtained from 33 infants admitted to the pediatric intensive care unit (PICU) with critical RSV bronchiolitis requiring non-invasive respiratory support (NIS) or invasive mechanical ventilation (IMV), and RNA sequencing (RNA-seq) was performed. Gene expression in participants who required shortened NIS (</= 3 days), prolonged NIS (> 3 days), and IMV was compared. Findings: Increased expression of ciliated cell genes and estimated ciliated cell abundance, but not immune cell abundance, positively correlated with duration of hospitalization in infants with critical bronchiolitis. A ciliated cell signature characterized infants who required NIS for > 3 days while a basal cell signature was present in infants who required NIS for </= 3 days, despite both groups requiring an equal degree of respiratory support at the time of sampling. Infants who required invasive mechanical ventilation had increased expression of genes involved in neutrophil activation and cell death. Interpretation: Increased expression of cilia-related genes in clinically indistinguishable infants with critical RSV may differentiate between infants who will require prolonged hospitalization and infants who will recover quickly. Validation of these findings in a larger cohort is needed to determine whether a cilia-related gene signature can predict duration of illness in infants with critical bronchiolitis. The ability to identify which infants with critical RSV bronchiolitis may require prolonged hospitalization using non-invasive nasal samples would provide invaluable prognostic information to parents and medical providers.

Indexed as

BronchiolitisRespiratory Syncytial Virus, HumanRespiratory Syncytial Virus InfectionsChildCiliaHumansInfantNasal MucosaSeverity of Illness Indexbronchiolitisnasal mucosapediatric critical careRNA-SeqRSV

Identifiers

PMID36211387
PMCPMC9540395
OpenAlexW4296824645

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.