Evidence map›Paper›PMID 36210597›Full record

ArticleJournal of molecular biology2022

Defective Human SRP Induces Protein Quality Control and Triggers Stress Response.

Elena B Tikhonova, Sneider Alexander Gutierrez Guarnizo, Morgana K Kellogg, Alexander Karamyshev, Igor M Dozmorov, Zemfira N Karamysheva, Andrey L Karamyshev

Open access · bronzeAbstract read
In one paragraph

Article in Journal of molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 13 citations in OpenAlex.

  1. Human SRP Subunits Coordinate Protein Targeting and mRNA Quality Control.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Pathogenic signal peptide variants in the human genome.NAR genomics and bioinformatics · 2023
    Article
  8. Amyloid Precursor Protein and Alzheimer's Disease.International journal of molecular sciences · 2023
    Review
  9. Specialized Ribosomes in Health and Disease.International journal of molecular sciences · 2023
    Review
  10. Aberrant protein targeting activates quality control on the ribosome.Frontiers in cell and developmental biology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Elena B TikhonovaDepartment of Cell Biology and Biochemistry, Texas Tech University Health Sciences Center, Lubbock, TX 79430, USA.
Sneider Alexander Gutierrez GuarnizoDepartment of Cell Biology and Biochemistry, Texas Tech University Health Sciences Center, Lubbock, TX 79430, USA.
Morgana K KelloggDepartment of Cell Biology and Biochemistry, Texas Tech University Health Sciences Center, Lubbock, TX 79430, USA.
Alexander KaramyshevDepartment of Cell Biology and Biochemistry, Texas Tech University Health Sciences Center, Lubbock, TX 79430, USA.
Igor M DozmorovUniversity of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Zemfira N KaramyshevaDepartment of Biological Sciences, Texas Tech University, Lubbock, TX 79409, USA.
Andrey L KaramyshevDepartment of Cell Biology and Biochemistry, Texas Tech University Health Sciences Center, Lubbock, TX 79430, USA. Electronic address: andrey.karamyshev@ttuhsc.edu.
Texas Tech University · US

Funding

Regulation of Aberrant Protein ProductionR01GM135167 · NIGMS · TEXAS TECH UNIVERSITY HEALTH SCIS CENTER · PI KARAMYSHEV, ANDREY L · 2019 to 2022
$1.3M
NIGMS NIH HHS R01 GM135167
6 · The paper itself

Abstract

Regulation of Aberrant Protein Production (RAPP) is a protein quality control in mammalian cells. RAPP degrades mRNAs of nascent proteins not able to associate with their natural interacting partners during synthesis at the ribosome. However, little is known about the molecular mechanism of the pathway, its substrates, or its specificity. The Signal Recognition Particle (SRP) is the first interacting partner for secretory proteins. It recognizes signal sequences of the nascent polypeptides when they are exposed from the ribosomal exit tunnel. Here, we reveal the generality of the RAPP pathway on the whole transcriptome level through depletion of human SRP54, an SRP subunit. This depletion triggers RAPP and leads to decreased expression of the mRNAs encoding a number of secretory and membrane proteins. The loss of SRP54 also leads to the dramatic upregulation of a specific network of HSP70/40/90 chaperones (HSPA1A, DNAJB1, HSP90AA1, and others), increased ribosome associated ubiquitination, and change in expression of RPS27 and RPS27L suggesting ribosome rearrangement. These results demonstrate the complex nature of defects in protein trafficking, mRNA and protein quality control, and provide better understanding of their mechanisms at the ribosome.

Indexed as

RibosomesSignal Recognition ParticleStress, PhysiologicalHSP40 Heat-Shock ProteinsHumansMembrane ProteinsMolecular ChaperonesPeptidesProtein BiosynthesisProtein Sorting SignalsRNA, MessengerRNA StabilityDNAJB1 protein, humanHSP40 Heat-Shock ProteinsMembrane ProteinsMolecular ChaperonesPeptidesProtein Sorting SignalsRNA, MessengerSignal Recognition ParticleSRP54 protein, humanprotein synthesis and transportsecretory proteinssignal Recognition particlesignal sequencetranslational control

Identifiers

PMID36210597
PMCPMC10024925
OpenAlexW4296285942

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.