Evidence map›Paper›PMID 36209660›Full record

ArticleTuberculosis (Edinburgh, Scotland)2022

Challenges and a potential solution to perform drug susceptibility testing of omadacycline against nontuberculous mycobacteria.

Prem Shankar, Sanjay Singh, Gunavanthi D Boorgula, Tawanda Gumbo, Scott K Heysell, Shashikant Srivastava

Open access · greenAbstract readLetter
In one paragraph

Article in Tuberculosis (Edinburgh, Scotland), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 2 pooled it
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 2 syntheses or guidelines pooled it, 23 citations in OpenAlex.

  1. Pooled it
  2. A systematic review of tetracyclines for nontuberculous mycobacteria: focus on rapidly growing mycobacteria.European respiratory review : an official journal of the European Respiratory Society · 2025
    Pooled it
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  4. Eravacycline forMicrobiology spectrum · 2026
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  8. Frontiers in microbiology · 2026
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  9. Antibiotic dose-response curves can measure antibiotic activity againstbioRxiv : the preprint server for biology · 2025
    Article
  10. Luciferase reporter mycobacteriophage (TM4::Journal of clinical microbiology · 2025
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  11. Repurposing drugs to advance the treatment of Buruli ulcer.Antimicrobial agents and chemotherapy · 2025
    Article
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  15. Antimicrobial agents and chemotherapy · 2024
    Article
  16. Article
  17. Article
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  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Prem ShankarDepartment of Pulmonary Immunology, University of Texas Health Science Centre at Tyler, Tyler, TX, USA.
Sanjay SinghDepartment of Pulmonary Immunology, University of Texas Health Science Centre at Tyler, Tyler, TX, USA.
Gunavanthi D BoorgulaDepartment of Pulmonary Immunology, University of Texas Health Science Centre at Tyler, Tyler, TX, USA.
Tawanda GumboQuantitative Preclinical & Clinical Sciences Department, Praedicare Inc., Dallas, TX, USA; Hollow Fiber System & Experimental Therapeutics Laboratories, Praedicare Inc, Dallas, TX, USA.
Scott K HeysellDivision of Infectious Diseases and International Health, University of Virginia, USA.
Shashikant SrivastavaDepartment of Pulmonary Immunology, University of Texas Health Science Centre at Tyler, Tyler, TX, USA. Electronic address: Shashi.kant@uthct.edu.
The University of Texas Health Science Center at Tyler · USBenedictine University · USUniversity of Virginia · US

Funding

Urine Colorimetry for Tuberculosis Pharmacokinetics Evaluation in Children and AdultsR01AI137080 · NIAID · UNIVERSITY OF VIRGINIA · PI Scott K Heysell, Leonid Kagan · 2018 to 2026
$6.3M
A randomized clinical trial of early empiric anti-Mycobacterium tuberculosis therapy for sepsis in sub-Saharan AfricaU01AI150508 · NIAID · UNIVERSITY OF VIRGINIA · PI HEYSELL, SCOTT K, MOORE, CHRISTOPHER CHARLES · 2020 to 2024
$3.3M
Reinforcing old warriors to treat Mycobacterium kansasii in shorter durationR21AI148096 · NIAID · UNIVERSITY OF TEXAS HLTH CTR AT TYLER · PI KANT, SHASHI · 2020 to 2021
$413k
NIAID NIH HHS R01 AI137080NIAID NIH HHS R21 AI148096NIAID NIH HHS U01 AI150508
6 · The paper itself

Abstract

backgroundMinimum inhibitory concentration (MIC) of slow growing mycobacteria (SGM) often do not correlate with the treatment response. Among the challenges is the identification of MIC of drugs that degrade in solution faster than the doubling time of the SGM.

methodsFirst, we identified the rate of omadacycline degradation in solution, and its effect on the rapidly growing methicillin resistant Staphylococcus aureus (MRSA). We then identified doubling times versus MICs for Mycobacterium abscessus, M. avium, and M. kansasii, with and without supplementation for degraded drug.

resultsOmadacycline concentration in solution declined ∼50% over 24hr. In the MRSA experiments, omadacycline demonstrated 66.48 ± 19.38% loss in potency over 24hr, confirming the degradation rate in solution. M. abscessus had a doubling time of 8.75 ± 1.23hr and the omadacycline MIC after 24hr of incubation was 2mg/L with and without 50% daily drug supplementation, indicating that drug degradation had no effect on this rapid grower. The doubling time for M. avium was 29.52hr (95% confidence interval (CI): 23.18-33.89hr) and 31.15hr (95%CI: 19.45-38.49 hr) for M. kansasii. The M. avium MICs ±50% daily omadacycline supplementation were 1mg/L and 0.5mg/L on day 7, whereas the M. kansasii MICs ±50% daily supplementation were >128mg/L and 32mg/L on day 7.

conclusionOmadacycline degradation in solution leads to falsely high MICs when SGM doubling time exceed the drug degradation rates in solution. The challenge could be overcome by daily drug supplementation to account for the loss of potency, which is laborious, or perhaps stabilizing the drug from degradation.

Indexed as

Methicillin-Resistant Staphylococcus aureusMycobacterium Infections, NontuberculousMycobacterium tuberculosisAnti-Bacterial AgentsHumansMicrobial Sensitivity TestsNontuberculous MycobacteriaTetracyclinesAnti-Bacterial AgentsomadacyclineTetracyclinesNontuberculous mycobacteriaSusceptibility testingTrailing effect

Identifiers

PMID36209660
PMCPMC10626481
OpenAlexW4301368832

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.