ArticleFrontiers in microbiology2022
High-throughput nanopore sequencing of
Abstract read
In one paragraph
Article in Frontiers in microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
5 citing papers in PubMed.
- Nanopore adaptive sampling to identify the NLR gene family in melon (Cucumis melo L.).BMC genomics · 2025Article
- Genomic Epidemiology of Treponema pallidum and Circulation of Strains With Diminished tprK Antigen Variation Capability in Seattle, 2021-2022.The Journal of infectious diseases · 2024Article
- Article
- The hare syphilis agent is related to, but distinct from, the treponeme causing rabbit syphilis.PloS one · 2024Article
- Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
40 authors.
Nicole A P LiebermanDepartment of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, WA, United States.
Thaddeus D ArmstrongDepartment of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, WA, United States.
Benjamin ChungDepartment of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, WA, United States.
Daniel PfalmerDepartment of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, WA, United States.
Christopher M HennellyDivision of Infectious Diseases, Institute for Global Health and Infectious Diseases, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Austin HaynesDivision of Allergy and Infectious Diseases, Department of Medicine, University of Washington School of Medicine, Seattle, WA, United States.
Emily RomeisDivision of Allergy and Infectious Diseases, Department of Medicine, University of Washington School of Medicine, Seattle, WA, United States.
Qian-Qiu WangInstitute of Dermatology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Rui-Li ZhangDepartment of Dermatology, The Second Affiliated Hospital of Nanjing Medical University, Nanjing, China.
Cai-Xia KouInstitute of Dermatology, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Giulia CiccareseSection of Dermatology, Department of Health Sciences, San Martino University Hospital, Genoa, Italy.
Ivano Dal ConteSexual Health Center, Department of Prevention, ASL Città di Torino, Turin, Italy.
Marco CusiniFondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, Milan, Italy.
Francesco DragoSection of Dermatology, Department of Health Sciences, San Martino University Hospital, Genoa, Italy.
Shu-Ichi NakayamaDepartment of Bacteriology I, National Institute of Infectious Diseases, Tokyo, Japan.
Kenichi LeeDepartment of Bacteriology I, National Institute of Infectious Diseases, Tokyo, Japan.
Makoto OhnishiDepartment of Bacteriology I, National Institute of Infectious Diseases, Tokyo, Japan.
Kelika A KondaUnit of Health, Sexuality and Human Development, Laboratory of Sexual Health, Universidad Peruana Cayetano-Heredia, Lima, Peru.
Silver K VargasUnit of Health, Sexuality and Human Development, Laboratory of Sexual Health, Universidad Peruana Cayetano-Heredia, Lima, Peru.
Maria EguiluzUnit of Health, Sexuality and Human Development, Laboratory of Sexual Health, Universidad Peruana Cayetano-Heredia, Lima, Peru.
Carlos F CaceresUnit of Health, Sexuality and Human Development, Laboratory of Sexual Health, Universidad Peruana Cayetano-Heredia, Lima, Peru.
Jeffrey D KlausnerKeck School of Medicine, University of Southern California, Los Angeles, CA, United States.
Oriol MitjaFight Aids and Infectious Diseases Foundation, Hospital Germans Trias i Pujol, Barcelona, Spain.
Anne RompaloDepartment of Infectious Diseases, Johns Hopkins Medical Institutions, Baltimore, MD, United States.
Fiona MulcahyDepartment of Genito Urinary Medicine and Infectious Diseases, St. James's Hospital, Dublin, Ireland.
Edward W HookDepartment of Medicine, University of Alabama at Birmingham, Birmingham, AL, United States.
Irving F HoffmanDivision of Infectious Diseases, Institute for Global Health and Infectious Diseases, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Mitch M MatogaDivision of Infectious Diseases, Institute for Global Health and Infectious Diseases, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Heping ZhengDermatology Hospital of Southern Medical University, Guangzhou, China.
Bin YangDermatology Hospital of Southern Medical University, Guangzhou, China.
Eduardo Lopez-MedinaCentro Internacional de Entrenamiento e Investigaciones Medicas (CIDEIM), Cali, Colombia.
Lady G RamirezCentro Internacional de Entrenamiento e Investigaciones Medicas (CIDEIM), Cali, Colombia.
Justin D RadolfDepartment of Medicine, UConn Health, Farmington, CT, United States.
Kelly L HawleyDepartment of Medicine, UConn Health, Farmington, CT, United States.
Juan C SalazarDepartment of Pediatrics, UConn Health, Farmington, CT, United States.
Sheila A LukehartDivision of Allergy and Infectious Diseases, Department of Medicine, University of Washington School of Medicine, Seattle, WA, United States.
Arlene C SeñaDivision of Infectious Diseases, Institute for Global Health and Infectious Diseases, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Jonathan B ParrDivision of Infectious Diseases, Institute for Global Health and Infectious Diseases, The University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.
Lorenzo GiacaniDivision of Allergy and Infectious Diseases, Department of Medicine, University of Washington School of Medicine, Seattle, WA, United States.
Alexander L GreningerDepartment of Laboratory Medicine and Pathology, University of Washington School of Medicine, Seattle, WA, United States.
Funding
Prevalence of syphilis and other sexually transmitted infections in men and transgender women who have sex with men in Cali, ColombiaU19AI144177 · NIAID · UNIVERSITY OF CONNECTICUT SCH OF MED/DNT · PI RADOLF, JUSTIN D · 2019 to 2023
$11.2MUniversity of Washington (UW) Sexually Transmitted Infections (STI) Cooperative Research Center (CRC) - Syphilis Vaccine to Protect against Local and Disseminated T. pallidum InfectionU19AI144133 · NIAID · UNIVERSITY OF WASHINGTON · PI WALD, ANNA · 2019 to 2023
$10.6MSyphilis Immunology and Biology to Improve Clinical Management and Vaccine DesignR01AI139265 · NIAID · UNIVERSITY OF SOUTHERN CALIFORNIA · PI Jeffrey David Klausner · 2018 to 2026
$4.8MNIAID NIH HHS R01 AI139265NIAID NIH HHS U19 AI144133NIAID NIH HHS U19 AI144177
Abstract
Sequencing of most
Indexed as
AlphaFoldgenomicsnanoporenext generation sequencing (NGS)SPOR domainsyphilisTreponema pallidumtrRosetta
Identifiers
What OpenQuestion holds
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LicenceCC BY
Read underepoch 390
Registered trials
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.