Evidence map›Paper›PMID 36204420›Full record

ArticleNetwork neuroscience (Cambridge, Mass.)2022

Empirical evaluation of human fetal fMRI preprocessing steps.

Lanxin Ji, Cassandra L Hendrix, Moriah E Thomason

Abstract read
In one paragraph

Article in Network neuroscience (Cambridge, Mass.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Temporal complexity of the BOLD-signal in preterm versus term infants.Cerebral cortex (New York, N.Y. : 1991) · 2024
    Article
  5. Review
  6. Review
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Lanxin JiDepartment of Child and Adolescent Psychiatry, New York University School of Medicine, New York, NY, USA.ORCID https://orcid.org/0000-0003-4509-0225
Cassandra L HendrixDepartment of Child and Adolescent Psychiatry, New York University School of Medicine, New York, NY, USA.
Moriah E ThomasonDepartment of Child and Adolescent Psychiatry, New York University School of Medicine, New York, NY, USA.

Funding

8/24 The Healthy Brain and Child Development National ConsortiumU01DA055338 · NIDA · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI Obianuju Berry, Lauren Christine Shuffrey · 2021 to 2026
$9.4M
Examining Prenatal Inflammation and Neurodevelopment in a Longitudinal Fetal-to-Age 9 Imaging Study - Administrative SupplementR01MH122447 · NIMH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI THOMASON, MORIAH E, TRENTACOSTA, CHRISTOPHER J · 2020 to 2025
$3.9M
“Overlapping and Discrete Pathways Through Which Prenatal Isolation and Uncertainty Stress Impact Maternal Mental Health and Child NeurodevelopmentR01MH126468 · NIMH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BRITO, NATALIE HIROMI, THOMASON, MORIAH E · 2021 to 2024
$3.0M
In Utero Assessment of the Human Neural Connectome and Later Child BehaviorR01MH110793 · NIMH · WAYNE STATE UNIVERSITY · PI THOMASON, MORIAH E · 2016 to 2021
$2.7M
From the womb to the classroom: Linking perinatal micronutrients and toxicants to neural and behavioral development in utero and in childhoodR01ES032294 · NIEHS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MARTINEZ, MAURO, THOMASON, MORIAH E · 2020 to 2024
$2.6M
4:4 Investigation of opioid exposure and neurodevelopment (iOPEN)R34DA050287 · NIDA · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BERGINK, VEERLE, THOMASON, MORIAH E · 2019 to 2021
$979k
Consequences of prenatal toxicant exposure on fetal brain functionR21ES026022 · NIEHS · MICHIGAN STATE UNIVERSITY · PI BURT, S. ALEXANDRA, THOMASON, MORIAH E · 2015 to 2016
$451k
NIDA NIH HHS R34 DA050287NIDA NIH HHS U01 DA055338NIEHS NIH HHS R01 ES032294NIEHS NIH HHS R21 ES026022NIMH NIH HHS R01 MH110793NIMH NIH HHS R01 MH122447NIMH NIH HHS R01 MH126468
6 · The paper itself

Abstract

Increased study and methodological innovation have led to growth in the field of fetal brain fMRI. An important gap yet to be addressed is optimization of fetal fMRI preprocessing. Rapid developmental changes, imaged within the maternal compartment using an abdominal coil, introduce novel constraints that challenge established methods used in adult fMRI. This study evaluates the impact of (1) normalization to a group mean-age template versus normalization to an age-matched template; (2) independent components analysis (ICA) denoising at two criterion thresholds; and (3) smoothing using three kernel sizes. Data were collected from 121 fetuses (25-39 weeks, 43.8% female). Results indicate that the mean age template is superior in older fetuses, but less optimal in younger fetuses. ICA denoising at a more stringent threshold is superior to less stringent denoising. A larger smoothing kernel can enhance cross-hemisphere functional connectivity. Overall, this study provides improved understanding of the impact of specific steps on fetal image quality. Findings can be used to inform a common set of best practices for fetal fMRI preprocessing.

Indexed as

DenoisingFetal fMRIFunctional connectivityNormalizationPreprocessingSmoothing

Identifiers

PMID36204420
PMCPMC9531599

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.