Evidence map›Paper›PMID 36200915›Full record

ArticleMicrobiology spectrum2022

Bacterial Outer Membrane Polysaccharide Export (OPX) Proteins Occupy Three Structural Classes with Selective β-Barrel Porin Requirements for Polymer Secretion.

Fares Saïdi, Utkarsha Mahanta, Adyasha Panda, Ahmad A Kezzo, Nicolas Y Jolivet, Razieh Bitazar, Gavin John, Matthew Martinez, Abdelkader Mellouk, Charles Calmettes and 3 more

Open access · goldAbstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 21 citations in OpenAlex.

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  8. Milestones in the development ofJournal of bacteriology · 2025
    Review
  9. Article
  10. Article
  11. Article
  12. An exopolysaccharide pathway from a freshwaterJournal of bacteriology · 2024
    Article
  13. Article
  14. A novel exopolysaccharide pathway from a freshwaterbioRxiv : the preprint server for biology · 2023
    Article
  15. Article
  16. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Fares Saïdi *Institut National de la Recherche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Université du Québec, Institut Pasteur International Network, Laval, Quebec, Canada.ORCID 0000-0001-6723-0781
Utkarsha Mahanta *Institute of Bioinformatics and Applied Biotechnology (IBAB), Bengaluru, Karnataka, India.ORCID 0000-0002-7543-7931
Adyasha PandaInstitute of Bioinformatics and Applied Biotechnology (IBAB), Bengaluru, Karnataka, India.ORCID 0000-0002-3375-8673
Ahmad A KezzoInstitut National de la Recherche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Université du Québec, Institut Pasteur International Network, Laval, Quebec, Canada.ORCID 0000-0002-6502-2847
Nicolas Y JolivetInstitut National de la Recherche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Université du Québec, Institut Pasteur International Network, Laval, Quebec, Canada.ORCID 0000-0002-3734-9797
Razieh BitazarInstitut National de la Recherche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Université du Québec, Institut Pasteur International Network, Laval, Quebec, Canada.
Gavin JohnDepartment of Pediatrics, Division of Infectious Diseases, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Matthew MartinezDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.
Abdelkader MelloukInstitut National de la Recherche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Université du Québec, Institut Pasteur International Network, Laval, Quebec, Canada.
Charles CalmettesInstitut National de la Recherche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Université du Québec, Institut Pasteur International Network, Laval, Quebec, Canada.ORCID 0000-0002-2542-4382
Yi-Wei ChangDepartment of Biochemistry and Biophysics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, Pennsylvania, USA.ORCID 0000-0003-2391-473X
Gaurav SharmaInstitute of Bioinformatics and Applied Biotechnology (IBAB), Bengaluru, Karnataka, India.ORCID 0000-0002-2861-7446
Salim T IslamInstitut National de la Recherche Scientifique (INRS), Centre Armand-Frappier Santé Biotechnologie, Université du Québec, Institut Pasteur International Network, Laval, Quebec, Canada.ORCID 0000-0001-6853-8446
Institut National de la Recherche Scientifique · CAInstitute of Bioinformatics and Applied Biotechnology · INUniversity of Pennsylvania · USChildren's Hospital of Philadelphia · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Secretion of high-molecular-weight polysaccharides across the bacterial envelope is ubiquitous, as it enhances prokaryotic survival in (a)biotic settings. Such polymers are often assembled by Wzx/Wzy- or ABC transporter-dependent schemes implicating outer membrane (OM) polysaccharide export (OPX) proteins in cell-surface polymer translocation. In the social predatory bacterium Myxococcus xanthus, the exopolysaccharide (EPS) pathway WzaX, major spore coat (MASC) pathway WzaS, and biosurfactant polysaccharide (BPS) pathway WzaB were herein found to be truncated OPX homologues of Escherichia coli Wza lacking OM-spanning α-helices. Comparative genomics across all bacteria (>91,000 OPX proteins identified and analyzed), complemented with cryo-electron tomography cell-envelope analyses, revealed such "truncated" WzaX/S/B architecture to be the most common among three defined OPX-protein structural classes independent of periplasm thickness. Fold recognition and deep learning revealed the conserved M. xanthus proteins MXAN_7418/3226/1916 (encoded beside

Indexed as

Escherichia coli ProteinsPorinsAcetylglucosamineATP-Binding Cassette TransportersBacterial Outer MembraneBacterial Outer Membrane ProteinsBacterial ProteinsEscherichia coliPolymersPolysaccharidesSugarsAcetylglucosamineATP-Binding Cassette TransportersBacterial Outer Membrane ProteinsBacterial ProteinsEscherichia coli ProteinspgaA protein, E coliPolymersPolysaccharidesPorinsSugarsABC transporter-dependent pathwaybiofilmscapsule polysaccharideDUF6029genomicsouter membraneouter membrane proteinsperiplasm thicknessporinssecretion systemssynthase-dependent pathwayWzx/Wzy-dependent pathway

Identifiers

PMID36200915
PMCPMC9603273
OpenAlexW4302761349

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.