Evidence map›Paper›PMID 36199586›Full record

ArticleInternational journal of general medicine2022

Analysis of Key Genes for Slow Transit Constipation Based on RNA Sequencing.

Linfeng Yu, Xiuding Yang, Wenlong Guan, Dongxu Zhang, Shuo Ren, Yanwei Xing, Da An, Jian Zhang, Yuekun Zhu, Anlong Zhu

Open access · goldAbstract read
In one paragraph

Article in International journal of general medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Linfeng Yu *Department of General Surgery, The First Affiliated Hospital of Harbin Medical University, Harbin, People's Republic of China.ORCID 0000-0002-8541-6827
Xiuding Yang *Department of General Surgery, The First Affiliated Hospital of Harbin Medical University, Harbin, People's Republic of China.
Wenlong GuanDepartment of General Surgery, The First Affiliated Hospital of Harbin Medical University, Harbin, People's Republic of China.
Dongxu ZhangDepartment of General Surgery, The First Affiliated Hospital of Harbin Medical University, Harbin, People's Republic of China.
Shuo RenDepartment of Gastrointestinal Surgery, Sichuan Cancer Hospital, Chengdu, People's Republic of China.
Yanwei XingDepartment of General Surgery, The First Affiliated Hospital of Harbin Medical University, Harbin, People's Republic of China.
Da AnDepartment of Anesthesiology, The First Affiliated Hospital of Harbin Medical University, Harbin, People's Republic of China.
Jian ZhangDepartment of General Surgery, The First Affiliated Hospital of Harbin Medical University, Harbin, People's Republic of China.
Yuekun ZhuDepartment of General Surgery, The First Affiliated Hospital of Harbin Medical University, Harbin, People's Republic of China.
Anlong ZhuDepartment of General Surgery, The First Affiliated Hospital of Harbin Medical University, Harbin, People's Republic of China.
Harbin Medical University · CNSichuan Cancer Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: This study aims to identify key genes in slow transit constipation (STC). We also sought to explore the potential link between STC and colorectal cancer. Patients and Methods: mRNA expression profiles were obtained by RNA sequencing, and differentially expressed genes were identified. Functional enrichment analysis and a protein-protein interaction (PPI) network was explored, and differentially expressed genes common to STC and colorectal cancer were examined. Analysis of the effect of constipation and colorectal cancer common genes on the overall survival of colorectal cancer patients based on GEPIA database. Results: Functional enrichment showed that significantly different genes are related to lymphocyte chemotaxis, positive regulation of inflammatory response, cellular response to tumor necrosis factor, extracellular region, extracellular space and chemokine activity. The hub gene for STC was found in the PPI network. In addition, AQP8 and CFD were common differential genes for STC and colorectal cancer. AQP8 affects overall survival in patients with colorectal cancer. Conclusion: Our findings will contribute to understanding the pathology of STC at the molecular level, with the first discovery that AQP8 may be a hub gene in the transition from STC to colorectal cancer.

Indexed as

AQP8colorectal cancerhub genesRNA sequencingslow transit constipation

Identifiers

PMID36199586
PMCPMC9528044
OpenAlexW4297347756

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.