Evidence map›Paper›PMID 36197973›Full record

ArticleScience advances2022

Critical role of lncEPAT in coupling dysregulated EGFR pathway and histone H2A deubiquitination during glioblastoma tumorigenesis.

Linlin Li, Aidong Zhou, Yanjun Wei, Feng Liu, Peng Li, Runping Fang, Li Ma, Sicong Zhang, Longqiang Wang, Jinze Liu and 4 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 49 citations in OpenAlex.

  1. Review
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  10. Epigenetics and environmental health.Frontiers of medicine · 2024
    Review
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  14. SEC61G assistsProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 4 institutions in 1 country.

Linlin LiDepartment of Human and Molecular Genetics, School of Medicine, Virginia Commonwealth University, Richmond, VA 23298, USA.ORCID 0000-0001-9184-4943
Aidong ZhouDepartment of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0003-3147-3313
Yanjun WeiDepartment of Bioinformatics & Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0003-4200-2859
Feng LiuLudwig Institute for Cancer Research, University of California, San Diego, La Jolla, CA 92093, USA.
Peng LiDepartment of Human and Molecular Genetics, School of Medicine, Virginia Commonwealth University, Richmond, VA 23298, USA.
Runping FangDepartment of Human and Molecular Genetics, School of Medicine, Virginia Commonwealth University, Richmond, VA 23298, USA.ORCID 0000-0002-7443-7155
Li MaDepartment of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0002-1796-9817
Sicong ZhangLaboratory of Biochemistry and Molecular Biology, The Rockefeller University, New York City, NY 10065, USA.
Longqiang WangDepartment of Neurosurgery, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Jinze LiuDepartment of Biostatistics, School of Medicine, Virginia Commonwealth University, Richmond, VA 23298, USA.
Hope T RichardVCU Massey Cancer Center, School of Medicine, Virginia Commonwealth University, Richmond, VA 23298, USA.ORCID 0000-0002-5956-0585
Yiwen ChenDepartment of Bioinformatics & Computational Biology, The University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.ORCID 0000-0002-7706-7540
Hengbin WangVCU Massey Cancer Center, School of Medicine, Virginia Commonwealth University, Richmond, VA 23298, USA.
Suyun HuangDepartment of Human and Molecular Genetics, School of Medicine, Virginia Commonwealth University, Richmond, VA 23298, USA.ORCID 0000-0001-7682-2631
Virginia Commonwealth University · USThe University of Texas MD Anderson Cancer Center · USRockefeller University · USUniversity of California San Diego · US

Funding

Virus Vector Shared ResourceP30CA016059 · NCI · VIRGINIA COMMONWEALTH UNIVERSITY · PI Keri R Maher · 1985 to 2026
$51.0M
Systematic dissection of function and mechanism of long non-coding RNAs in glioblastomaR01NS117668 · NINDS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI CHEN, YIWEN · 2021 to 2025
$2.0M
Integrative approaches for decoding the function and regulation of unconventional RNA translationR01GM130838 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI CHEN, YIWEN · 2019 to 2023
$1.8M
Interplay between ubiquitination and epigenetic regulation of EGFR signaling in gliomagenesis.R01NS101959 · NINDS · VIRGINIA COMMONWEALTH UNIVERSITY · PI HUANG, SUYUN · 2017 to 2021
$1.4M
Remodeling and Spacing Factor 1 in Histone H2A Ubiquitination-Mediated Gene SilencingR01GM130696 · NIGMS · VIRGINIA COMMONWEALTH UNIVERSITY · PI WANG, HENGBIN · 2019 to 2020
$593k
NCI NIH HHS P30 CA016059NIGMS NIH HHS R01 GM130696NIGMS NIH HHS R01 GM130838NINDS NIH HHS R01 NS101959NINDS NIH HHS R01 NS117668
6 · The paper itself

Abstract

Histone 2A (H2A) monoubiquitination is a fundamental epigenetics mechanism of gene expression, which plays a critical role in regulating cell fate. However, it is unknown if H2A ubiquitination is involved in EGFR-driven tumorigenesis. In the current study, we have characterized a previously unidentified oncogenic lncRNA (lncEPAT) that mediates the integration of the dysregulated EGFR pathway with H2A deubiquitination in tumorigenesis. LncEPAT was induced by the EGFR pathway, and high-level lncEPAT expression positively correlated with the glioma grade and predicted poor survival of glioma patients. Mass spectrometry analyses revealed that lncEPAT specifically interacted with deubiquitinase USP16. LncEPAT inhibited USP16's recruitment to chromatin, thereby blocking USP16-mediated H2A deubiquitination and repressing target gene expression, including

Indexed as

GlioblastomaRNA, Long NoncodingCarcinogenesisChromatinClusterinErbB ReceptorsHistonesHumansUbiquitin ThiolesteraseChromatinClusterinEGFR protein, humanErbB ReceptorsHistonesRNA, Long NoncodingUbiquitin Thiolesterase

Identifiers

PMID36197973
PMCPMC9534510
OpenAlexW4302011978

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.