Evidence map›Paper›PMID 36194887›Full record

ArticleThe journal of physical chemistry. A2022

Theoretical Study of the Structure and Binding Energies of Dimers of Zn(II)-Porphyrin Derivatives.

Sule Atahan-Evrenk

Abstract read
In one paragraph

Article in The journal of physical chemistry. A, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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0 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

1 author.

Sule Atahan-EvrenkFaculty of Medicine, TOBB University of Economics and Technology, Sogutozu Cd No. 43 Sogutozu, Ankara06560, Turkey.ORCID 0000-0002-4905-3491

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Zinc-complexed porphyrin and chlorophyll derivatives form functional aggregates with remarkable photophysical and optoelectronic properties. Understanding the type and strength of intermolecular interactions between these molecules is essential for designing new materials with desired morphology and functionality. The dimer interactions of a molecular set composed of porphyrin derivatives obtained by substitutional changes starting from free-base porphyrin is studied. It is found that the B97M-rV/def2-TZVP level of theory provides a good compromise between the accuracy and cost to get the dimer geometries and interaction energies (IEs). The neglect of the relaxation energy due to the change in the monomer configurations upon complex formation causes a more significant error than the basis set superposition error. The metal complexation increases the binding energy by about -6 to -8 kcal/mol, and the introduction of keto and hydroxy groups further stabilizes the dimers by about -20 kcal/mol. Although the saturation of one of the pyrrol double bonds does not change the IE, the addition of R groups increases it.

Indexed as

PorphyrinsChlorophyllMetalloporphyrinsModels, MolecularThermodynamicsZincChlorophyllMetalloporphyrinsPorphyrinsZinczinc hematoporphyrin

Identifiers

PMID36194887
PMCPMC9574925

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.