Evidence map›Paper›PMID 36194131›Full record

ArticleAmerican journal of physiology. Gastrointestinal and liver physiology2022

IMP1/IGF2BP1 in human colorectal cancer extracellular vesicles.

Madeline Kuhn, Yang Zhang, John Favate, Mayu Morita, Aurora Blucher, Sukanya Das, Shun Liang, Ranjan Preet, Louis R Parham, Kathy N Williams and 10 more

Open access · greenAbstract read
In one paragraph

Article in American journal of physiology. Gastrointestinal and liver physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 5 institutions in 1 country.

Madeline KuhnPediatric Gastroenterology Division, Department of Pediatrics, School of Medicine, Oregon Health and Science University, Portland, Oregon.
Yang ZhangPediatric Gastroenterology Division, Department of Pediatrics, School of Medicine, Oregon Health and Science University, Portland, Oregon.
John FavateDepartment of Genetics, Rutgers University, Piscataway, New Jersey.
Mayu MoritaDepartment of Pathology, Oregon Health and Science University, Portland, Oregon.
Aurora BlucherDivision of Oncological Sciences, Knight Cancer Institute, Oregon Health and Science University, Portland, Oregon.
Sukanya DasDepartment of Genetics, Rutgers University, Piscataway, New Jersey.
Shun LiangDepartment of Genetics, Rutgers University, Piscataway, New Jersey.
Ranjan PreetDepartment of Molecular Biosciences, University of Kansas Cancer Center, University of Kansas, Lawrence, Kansas.
Louis R ParhamDivision of Gastroenterology Hepatology and Nutrition, Children's Hospital of Philadelphia, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania.
Kathy N WilliamsDivision of Gastroenterology, Department of Medicine, Abramson Cancer Center, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania.
Sudheer MoluguElectron Microscopy Resource Lab, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania.
Randall J ArmstrongDivision of Oncological Sciences, Knight Cancer Institute, Oregon Health and Science University, Portland, Oregon.
Wei ZhangDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania.
Jiegang YangDepartment of Biology, University of Pennsylvania, Philadelphia, Pennsylvania.
Kathryn E HamiltonDivision of Gastroenterology Hepatology and Nutrition, Children's Hospital of Philadelphia, University of Pennsylvania Perelman School of Medicine, Philadelphia, Pennsylvania.ORCID 0000-0001-9575-2499
Dan A DixonDepartment of Molecular Biosciences, University of Kansas Cancer Center, University of Kansas, Lawrence, Kansas.
Gordon MillsDivision of Oncological Sciences, Knight Cancer Institute, Oregon Health and Science University, Portland, Oregon.
Terry K MorganDepartment of Pathology, Oregon Health and Science University, Portland, Oregon.
Premal ShahDepartment of Genetics, Rutgers University, Piscataway, New Jersey.
Sarah F AndresPediatric Gastroenterology Division, Department of Pediatrics, School of Medicine, Oregon Health and Science University, Portland, Oregon.ORCID 0000-0001-7587-2637
Oregon Health & Science University · USRutgers, The State University of New Jersey · USUniversity of Pennsylvania · USChildren's Hospital of Philadelphia · USUniversity of Kansas · US

Funding

The LIN28b-Let7-IMP1 axis in colonic epithelial biologyR01DK056645 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI RUSTGI, ANIL K · 2000 to 2021
$6.8M
Homeostatic Responses to Amino Acid InsufficiencyR01DK109714 · NIDDK · RUTGERS, THE STATE UNIV OF N.J. · PI ANTHONY, TRACY G., WEK, RONALD C · 2016 to 2024
$5.4M
Nano-Engineered Lab-on-a-Chip for Assessing HuR-Regulated Exosomes for Cancer Monitoring and Targeted TherapyR01CA243445 · NCI · UNIVERSITY OF KANSAS LAWRENCE · PI DIXON, DAN ALAN, XU, LIANG · 2019 to 2023
$3.0M
Defining post-transcriptional regulons in intestinal epithelial regenerationR01DK124369 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI HAMILTON, KATHRYN ELIZABETH · 2020 to 2024
$2.6M
Dynamics and evolution of translational regulationR35GM124976 · NIGMS · RUTGERS, THE STATE UNIV OF N.J. · PI SHAH, PREMAL R · 2017 to 2021
$1.9M
The LIN28b-Let7 axis in intestinal epithelial biologyR56DK056645 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI RUSTGI, ANIL K · 2013 to 2013
$320k
Interplay of IMP1 and autophagy in intestinal barrier function and tumorigenesisF32DK107052 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI ANDRES, SARAH · 2015 to 2017
$109k
NCI NIH HHS R01 CA243445NIDDK NIH HHS F32 DK107052NIDDK NIH HHS R01 DK056645NIDDK NIH HHS R01 DK109714NIDDK NIH HHS R01 DK124369NIDDK NIH HHS R56 DK056645NIGMS NIH HHS R35 GM124976
6 · The paper itself

Abstract

Colorectal cancer (CRC) is a leading cause of cancer-related death. There is an urgent need for new methods of early CRC detection and monitoring to improve patient outcomes. Extracellular vesicles (EVs) are secreted, lipid-bilayer bound, nanoparticles that carry biological cargo throughout the body and in turn exhibit cancer-related biomarker potential. RNA binding proteins (RBPs) are posttranscriptional regulators of gene expression that may provide a link between host cell gene expression and EV phenotypes. Insulin-like growth factor 2 RNA binding protein 1 (IGF2BP1/IMP1) is an RBP that is highly expressed in CRC with higher levels of expression correlating with poor prognosis. IMP1 binds and potently regulates tumor-associated transcripts that may impact CRC EV phenotypes. Our objective was to test whether IMP1 expression levels impact EV secretion and/or cargo. We used RNA sequencing, in vitro CRC cell lines, ex vivo colonoid models, and xenograft mice to test the hypothesis that IMP1 influences EV secretion and/or cargo in human CRC. Our data demonstrate that IMP1 modulates the RNA expression of transcripts associated with extracellular vesicle pathway regulation, but it has no effect on EV secretion levels in vitro or in vivo. Rather, IMP1 appears to affect EV regulation by directly entering EVs in a transformation-dependent manner. These findings suggest that IMP1 has the ability to shape EV cargo in human CRC, which could serve as a diagnostic/prognostic circulating tumor biomarker.

Indexed as

Colorectal NeoplasmsExtracellular VesiclesAnimalsBiomarkers, TumorHumansMiceRNA-Binding ProteinsRNA, MessengerBiomarkers, TumorRNA-Binding ProteinsRNA, Messengercolorectal adenocarcinomaexosomeliquid biopsyRNA binding protein

Identifiers

PMID36194131
PMCPMC9678429
OpenAlexW4300979627

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.