Evidence map›Paper›PMID 36193754›Full record

ArticleHuman molecular genetics2023

Identifying an oligodendrocyte enhancer that regulates Olig2 expression.

Chuandong Fan, Dongkyeong Kim, Hongjoo An, Yungki Park

Open access · hybridAbstract read
In one paragraph

Article in Human molecular genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. OPALIN is an LGI1 receptor promoting oligodendrocyte differentiation.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Chuandong FanInstitute for Myelin and Glia Exploration, Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY 14203, USA.
Dongkyeong KimInstitute for Myelin and Glia Exploration, Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY 14203, USA.
Hongjoo An
Yungki ParkInstitute for Myelin and Glia Exploration, Department of Biochemistry, Jacobs School of Medicine and Biomedical Sciences, State University of New York at Buffalo, Buffalo, NY 14203, USA.ORCID 0000-0003-2839-848X
University at Buffalo, State University of New York · USAlbert Einstein College of Medicine · US

Funding

Transcription mechanism of Myrf for central nervous system myelinationR01NS094181 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI PARK, YUNGKI · 2015 to 2019
$1.8M
Role of oligodendrocyte enhancers in central nervous system development and diseaseR21NS102558 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI PARK, YUNGKI · 2018 to 2019
$439k
Identifying oligodendrocyte enhancers that govern the expression of Olig1/2R21NS112608 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI PARK, YUNGKI · 2019 to 2019
$439k
Systematic discovery of critical oligodendrocyte transcription factors by a CRISPRi screenR21NS114476 · NINDS · STATE UNIVERSITY OF NEW YORK AT BUFFALO · PI PARK, YUNGKI · 2020 to 2020
$439k
NINDS NIH HHS R01 NS094181NINDS NIH HHS R21 NS102558NINDS NIH HHS R21 NS112608NINDS NIH HHS R21 NS114476
6 · The paper itself

Abstract

Olig2 is a basic helix-loop-helix transcription factor that plays a critical role in the central nervous system. It directs the specification of motor neurons and oligodendrocyte precursor cells (OPCs) from neural progenitors and the subsequent maturation of OPCs into myelin-forming oligodendrocytes (OLs). It is also required for the development of astrocytes. Despite a decade-long search, enhancers that regulate the expression of Olig2 remain elusive. We have recently developed an innovative method that maps promoter-distal enhancers to genes in a principled manner. Here, we applied it to Olig2 in the context of OL lineage cells, uncovering an OL enhancer for it (termed Olig2-E1). Silencing Olig2-E1 by CRISPRi epigenome editing significantly downregulated Olig2 expression. Luciferase assay and ATAC-seq and ChIP-seq data show that Olig2-E1 is an OL-specific enhancer that is conserved across human, mouse and rat. Hi-C data reveal that Olig2-E1 physically interacts with OLIG2 and suggest that this interaction is specific to OL lineage cells. In sum, Olig2-E1 is an evolutionarily conserved OL-specific enhancer that drives the expression of Olig2.

Indexed as

Basic Helix-Loop-Helix ProteinsNerve Tissue ProteinsAnimalsCell DifferentiationHumansMiceMyelin SheathOligodendrocyte Transcription Factor 2OligodendrogliaRatsBasic Helix-Loop-Helix ProteinsNerve Tissue ProteinsOLIG2 protein, humanOlig2 protein, mouseOligodendrocyte Transcription Factor 2

Identifiers

PMID36193754
PMCPMC9941837
OpenAlexW4301391589

What OpenQuestion holds

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LicenceCC BY-NC
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.