Evidence map›Paper›PMID 36192710›Full record

ArticleBMC plant biology2022

Transcriptome analysis reveals the roles of phytohormone signaling in tea plant (Camellia sinensis L.) flower development.

Xiaohan Xu, Jing Tao, Anqi Xing, Zichen Wu, Yuqin Xu, Yi Sun, Jiangyuan Zhu, Xiang Dai, Yuhua Wang

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Xiaohan XuCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Jing TaoCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Anqi XingCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Zichen WuCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Yuqin XuTea Research Institute of Tianmu Lake in Liyang Changzhou, Changzhou, 213300, China.
Yi SunCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Jiangyuan ZhuCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Xiang DaiCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China.
Yuhua WangCollege of Horticulture, Nanjing Agricultural University, Nanjing, 210095, China. wangyuhua@njau.edu.cn.
Nanjing Agricultural University · CNTea Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundTea plant (Camellia sinensis (L.) O. Kuntze) is an important economic tea crop, but flowering will consume a lot of nutrients of C. sinensis, which will seriously affect the nutritional growth of C. sinensis. However, there are few studies on the development mechanism of C. sinensis flower, and most studies focus on a single C. sinensis cultivar.

resultsHere, we identified a 92-genes' C. sinensis flower development core transcriptome from the transcriptome of three C. sinensis cultivars ('BaiYe1', 'HuangJinYa' and 'SuChaZao') in three developmental stages (bud stage, white bud stage and blooming stage). In addition, we also reveal the changes in endogenous hormone contents and the expression of genes related to synthesis and signal transduction during the development of C. sinensis flower. The results showed that most genes of the core transcriptome were involved in circadian rhythm and autonomous pathways. Moreover, there were only a few flowering time integrators, only 1 HD3A, 1 SOC1 and 1 LFY, and SOC1 played a dominant role in the development of C. sinensis flower. Furthermore, we screened out 217 differentially expressed genes related to plant hormone synthesis and 199 differentially expressed genes related to plant hormone signal transduction in C. sinensis flower development stage.

conclusionsBy constructing a complex hormone regulation network of C. sinensis flowering, we speculate that MYC, FT, SOC1 and LFY play key roles in the process of endogenous hormones regulating C. sinensis flowering development. The results of this study can a provide reference for the further study of C. sinensis flowering mechanism.

Indexed as

Camellia sinensisFlowersGene Expression ProfilingGene Expression Regulation, PlantHormonesPlant Growth RegulatorsPlant ProteinsSignal TransductionTeaTranscriptomeHormonesPlant Growth RegulatorsPlant ProteinsTeaCamellia sinensisFlower developmentPhytohormoneTranscriptome (RNA-seq)

Identifiers

PMID36192710
PMCPMC9531472
OpenAlexW4300816604

What OpenQuestion holds

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.