Evidence map›Paper›PMID 36191192›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

A single helix repression domain is functional across diverse eukaryotes.

Alexander R Leydon, Román Ramos Báez, Jennifer L Nemhauser

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Alexander R LeydonDepartment of Biology, University of Washington, Seattle, WA 98105-1800.ORCID 0000-0003-3034-1482
Román Ramos BáezDepartment of Biology, University of Washington, Seattle, WA 98105-1800.ORCID 0000-0002-0934-5342
Jennifer L NemhauserDepartment of Biology, University of Washington, Seattle, WA 98105-1800.ORCID 0000-0002-8909-735X
University of Washington · US

Funding

Control of protein degradation dynamics in the auxin responseR01GM107084 · NIGMS · UNIVERSITY OF WASHINGTON · PI NEMHAUSER, JENNIFER L · 2014 to 2022
$2.4M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM107084
6 · The paper itself

Abstract

The corepressor TOPLESS (TPL) and its paralogs coordinately regulate a large number of genes critical to plant development and immunity. As in many members of the larger pan-eukaryotic Tup1/TLE/Groucho corepressor family, TPL contains a Lis1 Homology domain (LisH), whose function is not well understood. We have previously found that the LisH in TPL-and specifically the N-terminal 18 amino acid alpha-helical region (TPL-H1)-can act as an autonomous repression domain. We hypothesized that homologous domains across diverse LisH-containing proteins could share the same function. To test that hypothesis, we built a library of H1s that broadly sampled the sequence and evolutionary space of LisH domains, and tested their activity in a synthetic transcriptional repression assay in

Indexed as

Saccharomyces cerevisiaeTranscription FactorsAmino AcidsCo-Repressor ProteinsHumansAmino AcidsCo-Repressor ProteinsTranscription FactorsLisH co-repressorTPLtranscriptional repression

Identifiers

PMID36191192
PMCPMC9564828
OpenAlexW4300594431

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.