Evidence map›Paper›PMID 36190281›Full record

ArticleJournal of visualized experiments : JoVE2022

C. elegans Gonad Dissection and Freeze Crack for Immunofluorescence and DAPI Staining.

Deepshikha Ananthaswamy, Jaime C Croft, Natilia Woozencroft, Teresa W Lee

Open access · hybridAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 40% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Expanding thebioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. NuRD chromatin remodeling is required to repair exogenous DSBs in thebioRxiv : the preprint server for biology · 2025
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Deepshikha Ananthaswamy *Department of Biological Sciences, University of Massachusetts Lowell.
Jaime C Croft *Department of Biological Sciences, University of Massachusetts Lowell.
Natilia WoozencroftDepartment of Biological Sciences, University of Massachusetts Lowell.
Teresa W LeeDepartment of Biological Sciences, University of Massachusetts Lowell; teresa_lee@uml.edu.
University of Massachusetts Lowell · US

Funding

Enhancing and expanding the CGC Strain CollectionP40OD010440 · OD · UNIVERSITY OF MINNESOTA · PI Ann E. Rougvie · 2012 to 2026
$7.5M
Research Supplement to promote diversity for parent grant: Linking transgenerational epigenetic inheritance to gene expression and lifespan in C. elegansR15GM144861 · NIGMS · UNIVERSITY OF MASSACHUSETTS LOWELL · PI LEE, TERESA WEI-SY · 2021 to 2023
$406k
Chromatin-mediated maintenance of genomic integrity in germ cellsR15HD104115 · NICHD · MARIST COLLEGE · PI CHECCHI, PAULA M, DENNIS, MEGAN KATHLEEN · 2021 to 2021
$346k
NICHD NIH HHS R15 HD104115NIGMS NIH HHS R15 GM144861NIH HHS P40 OD010440
6 · The paper itself

Abstract

The C. elegans germline makes an excellent model for studying meiosis, in part due to the ease of conducting cytological analyses on dissected animals. Whole mount preparations preserve the structure of meiotic nuclei, and importantly, each gonad arm contains all stages of meiosis, organized in a temporal-spatial progression that makes it easy to identify nuclei at different stages. Adult hermaphrodites have two gonad arms, each organized as a closed tube with proliferating germline stem cells at the distal closed end and cellularized oocytes at the proximal open end, which join in the center at the uterus. Dissection releases one or both gonad arms from the body cavity, allowing the entirety of meiosis to be visualized. Here, a common protocol for immunofluorescence against a protein of interest is presented, followed by DAPI staining to mark all chromosomes. Young adults are immobilized in levamisole and quickly dissected using two syringe needles. After germline extrusion, the sample is fixed before undergoing a freeze crack in liquid nitrogen, which helps permeabilize the cuticle and other tissues. The sample can then be dehydrated in ethanol, rehydrated, and incubated with primary and secondary antibodies. DAPI is added to the sample in the mounting medium, which allows reliable visualization of DNA and makes it easy to find animals to image under a fluorescent microscope. This technique is readily adopted by those familiar with handling C. elegans after a few hours spent practicing the dissection method itself. This protocol has been taught to high-schoolers and undergraduates working in a research lab and incorporated into a course-based undergraduate research experience at a liberal arts college.

Indexed as

Caenorhabditis elegansCaenorhabditis elegans ProteinsAnimalsEthanolFemaleFluorescent Antibody TechniqueGerm CellsGonadsIndolesLevamisoleMeiosisNitrogenStaining and LabelingCaenorhabditis elegans ProteinsDAPIEthanolIndolesLevamisoleNitrogen

Identifiers

PMID36190281
PMCPMC10018647
OpenAlexW4297445925

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.