Evidence map›Paper›PMID 36190269›Full record

ArticleJournal of visualized experiments : JoVE2022

Subcellular Fractionation for the Isolation of Synaptic Components from the Murine Brain.

Sofia Massaro Tieze, Sreeganga S Chandra, D J Vidyadhara

Open access · greenAbstract readVideo-Audio Media
In one paragraph

Article in Journal of visualized experiments : JoVE, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Sofia Massaro TiezeDepartment of Neurology, Yale University; Department of Neuroscience, Yale University; Interdepartmental Neuroscience Program, Yale University.
Sreeganga S ChandraDepartment of Neurology, Yale University; Department of Neuroscience, Yale University.
D J VidyadharaDepartment of Neurology, Yale University; Department of Neuroscience, Yale University; vidyadhara.dj@yale.edu.
Yale University · US

Funding

Yale/NIDA Neuroproteomics Research CenterP30DA018343 · NIDA · YALE UNIVERSITY · PI Marina R Picciotto · 2004 to 2026
$37.1M
Interdepartmental Neuroscience Program (INP)T32NS041228 · NINDS · YALE UNIVERSITY · PI Charles A Greer, Marina R Picciotto · 2001 to 2026
$12.0M
NEUROBIOLOGY OF CORTICAL SYSTEMST32NS007224 · NINDS · YALE UNIVERSITY · PI CARDIN, JESSICA A · 1985 to 2025
$4.6M
Role of Glucosylsphingosine in Parkinson Disease and Dementia with Lewy BodiesRF1NS110354 · NINDS · YALE UNIVERSITY · PI CHANDRA, SREEGANGA S · 2019 to 2022
$2.5M
Roles of the CSPalpha Chaperone Complex in Presynaptic Maintenance and ANCLR01NS083846 · NINDS · YALE UNIVERSITY · PI CHANDRA, SREEGANGA S · 2014 to 2018
$2.2M
The Physiological Functions of SynucleinsR01NS064963 · NINDS · YALE UNIVERSITY · PI CHANDRA, SREEGANGA S · 2010 to 2014
$1.6M
Elucidating GBA-linked Parkinson's disease and Dementia with Lewy BodiesR01NS110354 · NINDS · YALE UNIVERSITY · PI Sreeganga S Chandra · 2026 to 2026
$654k
Identifying the neuronal substrates of the depalmitoylating enzyme PPT1R21NS094971 · NINDS · YALE UNIVERSITY · PI CHANDRA, SREEGANGA S · 2016 to 2017
$460k
NIDA NIH HHS P30 DA018343NINDS NIH HHS R01 NS064963NINDS NIH HHS R01 NS083846NINDS NIH HHS R01 NS110354NINDS NIH HHS R21 NS094971NINDS NIH HHS RF1 NS110354NINDS NIH HHS T32 NS007224NINDS NIH HHS T32 NS041228
6 · The paper itself

Abstract

Synaptic terminals are the primary sites of neuronal communication. Synaptic dysfunction is a hallmark of many neuropsychiatric and neurological disorders. The characterization of synaptic sub-compartments by biochemical isolation is, therefore, a powerful method to elucidate the molecular bases of synaptic processes, both in health and disease. This protocol describes the isolation of synaptic terminals and synaptic sub-compartments from mouse brains by subcellular fractionation. First, sealed synaptic terminal structures, known as synaptosomes, are isolated following brain tissue homogenization. Synaptosomes are neuronal pre- and post-synaptic compartments with pinched-off and sealed membranes. These structures retain a metabolically active state and are valuable for studying synaptic structure and function. The synaptosomes are then subjected to hypotonic lysis and ultracentrifugation to obtain synaptic sub-compartments enriched for synaptic vesicles, synaptic cytosol, and synaptic plasma membrane. Fraction purity is confirmed by electron microscopy and biochemical enrichment analysis for proteins specific to sub-synaptic compartments. The presented method is a straightforward and valuable tool for studying the structural and functional characteristics of the synapse and the molecular etiology of various brain disorders.

Indexed as

Synaptic MembranesSynaptosomesAnimalsBrainCell FractionationMiceSubcellular FractionsSynaptic Vesicles

Identifiers

PMID36190269
PMCPMC10936730
OpenAlexW4295932929

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.