Evidence map›Paper›PMID 36190242›Full record

ArticleJournal of virology2022

Diverse RNA Viruses Associated with Diatom, Eustigmatophyte, Dinoflagellate, and Rhodophyte Microalgae Cultures.

Justine Charon, Tim Kahlke, Michaela E Larsson, Raffaela Abbriano, Audrey Commault, Joel Burke, Peter Ralph, Edward C Holmes

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.2field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. The RNA virosphere: How big and diverse is it?Environmental microbiology · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Justine CharonSydney Institute for Infectious Diseases, School of Life and Environmental Sciences and School of Medical Sciences, University of Sydneygrid.1013.3, Sydney, New South Wales, Australia.
Tim KahlkeClimate Change Cluster (C3), Faculty of Science, University of Technology Sydney, New South Wales, Australia.
Michaela E LarssonClimate Change Cluster (C3), Faculty of Science, University of Technology Sydney, New South Wales, Australia.
Raffaela AbbrianoClimate Change Cluster (C3), Faculty of Science, University of Technology Sydney, New South Wales, Australia.
Audrey CommaultClimate Change Cluster (C3), Faculty of Science, University of Technology Sydney, New South Wales, Australia.
Joel BurkeClimate Change Cluster (C3), Faculty of Science, University of Technology Sydney, New South Wales, Australia.
Peter RalphClimate Change Cluster (C3), Faculty of Science, University of Technology Sydney, New South Wales, Australia.
Edward C HolmesSydney Institute for Infectious Diseases, School of Life and Environmental Sciences and School of Medical Sciences, University of Sydneygrid.1013.3, Sydney, New South Wales, Australia.ORCID 0000-0001-9596-3552
University of Technology Sydney · AUThe University of Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Unicellular microalgae are of immense ecological importance with growing commercial potential in industries such as renewable energy, food, and pharmacology. Viral infections can have a profound impact on the growth and evolution of their hosts. However, very little is known of the diversity within, and the effect of, unicellular microalgal RNA viruses. In addition, identifying RNA viruses in these organisms that could have originated more than a billion years ago constitutes a robust data set to dissect molecular events and address fundamental questions in virus evolution. We assessed the diversity of RNA viruses in eight microalgal cultures, including representatives from the diatom, eustigmatophyte, dinoflagellate, red algae, and euglenid groups. Using metatranscriptomic sequencing combined with bioinformatic approaches optimized to detect highly divergent RNA viruses, we identified 10 RNA virus sequences, with nine constituting new viral species. Most of the newly identified RNA viruses belonged to the double-stranded

Indexed as

DiatomsDinoflagellidaMicroalgaeRNA VirusesGenome, ViralPhylogenyPlantsRNARNAdiatomevolutionmetagenomicsmicroalgaeviromevirosphere

Identifiers

PMID36190242
PMCPMC9599419
OpenAlexW4300689512

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.