Evidence map›Paper›PMID 36189719›Full record

ArticleActa crystallographica. Section F, Structural biology communications2022

Purification, crystallization and crystallographic analysis of the PorX response regulator associated with the type IX secretion system.

Anshu Saran, Nuwani Weerasinghe, Christopher J Thibodeaux, Natalie Zeytuni

Open access · greenAbstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
  3. Structure-function analysis of PorXScientific reports · 2024
    Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Anshu SaranThe Department of Anatomy and Cell Biology and the Department of Biochemistry, McGill University, Montreal, Quebec, Canada.
Nuwani WeerasingheThe Department of Chemistry, McGill University, Montreal, Quebec, Canada.
Christopher J ThibodeauxThe Department of Chemistry, McGill University, Montreal, Quebec, Canada.
Natalie ZeytuniThe Department of Anatomy and Cell Biology and the Department of Biochemistry, McGill University, Montreal, Quebec, Canada.ORCID 0000-0002-5708-4095
McGill University · CA

Funding

Alzheimer's Association AARGD-NTF-21-851231
6 · The paper itself

Abstract

Pathogenic bacteria utilize specialized macromolecular secretion systems to transport virulence factors across membrane(s) and manipulate their infected host. To date, 11 secretion systems have been identified, including the type IX secretion system (T9SS) associated with human, avian and farmed-fish diseases. As a bacterial secretion system, the T9SS also facilitates gliding motility and the degradation of different macromolecules by the secretion of metabolic enzymes in nonpathogenic bacteria. PorX is a highly conserved protein that regulates the transcription of essential T9SS components and additionally mediates the function of T9SS via direct interaction with PorL, the rotary motor protein of the T9SS. PorX is also a member of a two-component system regulatory cascade, where it serves as the response regulator that relays a signal transduced from a conserved sensor histidine kinase, PorY, to a designated sigma factor. Here, the recombinant expression and purification of PorX homologous proteins from the pathogenic bacterium Porphyromonas gingivalis and the nonpathogenic bacterium Flavobacterium johnsoniae are reported. A bioinformatical characterization of the different domains comprising the PorX protein is also provided, and the crystallization and X-ray analysis of PorX from F. johnsoniae are reported.

Indexed as

Bacterial ProteinsSigma FactorAnimalsBacterial Secretion SystemsCrystallizationCrystallography, X-RayHistidine KinaseHumansPorphyromonas gingivalisVirulence FactorsBacterial ProteinsBacterial Secretion SystemsHistidine KinaseSigma FactorVirulence Factorsbacterial pathogenesisbacterial secretion systemsPorX response regulatorresponse regulatorstwo-component systemstype IX secretion system

Identifiers

PMID36189719
PMCPMC9527653
OpenAlexW4297238482

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.