Evidence map›Paper›PMID 36189437›Full record

ArticleJournal of oral microbiology2022

Functional signatures

Dina G Moussa, Ashok K Sharma, Tamer A Mansour, Bruce Witthuhn, Jorge Perdigão, Joel D Rudney, Conrado Aparicio, Andres Gomez

Abstract read
In one paragraph

Article in Journal of oral microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Dina G MoussaMinnesota Dental Research Center for Biomaterials and Biomechanics, Department of Restorative Sciences, School of Dentistry, University of Minnesota, Minneapolis, Minnesota, USA.ORCID https://orcid.org/0000-0003-0376-3452
Ashok K SharmaDepartment of Animal Science, College of Food, Agriculture and Natural Resource Sciences, University of Minnesota, St Paul, Minnesota, USA.
Tamer A MansourDepartment of Population Health and Reproduction, School of Veterinary Medicine, University of California, Davis, CA, USA.ORCID https://orcid.org/0000-0002-4747-4241
Bruce WitthuhnCenter for Mass Spectrometry and Proteomics, Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, Minnesota, USA.
Jorge PerdigãoDepartment of Restorative Sciences, School of Dentistry, University of Minnesota, Minneapolis, Minnesota, USA.ORCID https://orcid.org/0000-0003-1841-6365
Joel D RudneyDepartment of Diagnostic and Biological Sciences, School of Dentistry, University of Minnesota, Minneapolis, Minnesota, USA.
Conrado AparicioMinnesota Dental Research Center for Biomaterials and Biomechanics, Department of Restorative Sciences, School of Dentistry, University of Minnesota, Minneapolis, Minnesota, USA.ORCID https://orcid.org/0000-0003-2969-6067
Andres GomezDepartment of Animal Science, College of Food, Agriculture and Natural Resource Sciences, University of Minnesota, St Paul, Minnesota, USA.ORCID https://orcid.org/0000-0002-1174-0368

Funding

Minnesota Craniofacial Research Training ProgramR90DE023058 · NIDCR · UNIVERSITY OF MINNESOTA · PI MANSKY, KIM CARPENTER · 2012 to 2022
$1.2M
A novel peptide-enhanced class-V dental restorative system with a 3-tier fortificationR01DE026117 · NIDCR · UNIVERSITY OF MINNESOTA · PI APARICIO, CONRADO · 2016 to 2018
$1.1M
NIDCR NIH HHS R01 DE026117NIDCR NIH HHS R90 DE023058
6 · The paper itself

Abstract

Background: The etiology of dental caries remains poorly understood. With the advent of next-generation sequencing, a number of studies have focused on the microbial ecology of the disease. However, taxonomic associations with caries have not been consistent. Researchers have also pursued function-centric studies of the caries microbial communities aiming to identify consistently conserved functional pathways. A major question is whether changes in microbiome are a cause or a consequence of the disease. Thus, there is a critical need to define conserved functional signatures at the onset of dental caries. Methods: Since it is unethical to induce carious lesions clinically, we developed an innovative longitudinal Findings: For the first time, we induced longitudinally monitored caries lesions validated with the scanning electron microscope. Consequently, we spotted the caries onset and, associated with it, distinguished five differentiating metabolites - Lactate, Pyruvate, Dihydroxyacetone phosphate, Glyceraldehyde 3-phosphate (upregulated) and Fumarate (downregulated). Those metabolites co-occurred with certain bacterial taxa; Interpretation: These findings are crucial for understanding the etiology and dynamics of dental caries, and devising targeted interventions to prevent disease progression.

Indexed as

Dental cariesgenomicslongitudinal modelmetabolomicsNon-invasive bioimagingsignatures

Identifiers

PMID36189437
PMCPMC9518263

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.