Evidence map›Paper›PMID 36189278›Full record

ArticleFrontiers in immunology2022

SP-A binding to the SARS-CoV-2 spike protein using hybrid quantum and classical in silico modeling and molecular pruning by Quantum Approximate Optimization Algorithm (QAOA) Based MaxCut with ZDOCK.

Sona Aramyan, Kirk McGregor, Samarth Sandeep, Angela Haczku

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 2 pooled it
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 2 syntheses or guidelines pooled it, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Sona AramyanIf and Only If (Iff) Technologies, Pleasanton, CA, United States.
Kirk McGregorIf and Only If (Iff) Technologies, Pleasanton, CA, United States.
Samarth SandeepIf and Only If (Iff) Technologies, Pleasanton, CA, United States.
Angela HaczkuUniversity of California (UC) Davis Lung Center Pulmonary, Critical Care and Sleep Division, Department of Medicine, School of Medicine, University of California, Davis, CA, United States.
Ian's Friends Foundation · USUniversity of California, Davis · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The pulmonary surfactant protein A (SP-A) is a constitutively expressed immune-protective collagenous lectin (collectin) in the lung. It binds to the cell membrane of immune cells and opsonizes infectious agents such as bacteria, fungi, and viruses through glycoprotein binding. SARS-CoV-2 enters airway epithelial cells by ligating the Angiotensin Converting Enzyme 2 (ACE2) receptor on the cell surface using its Spike glycoprotein (S protein). We hypothesized that SP-A binds to the SARS-CoV-2 S protein and this binding interferes with ACE2 ligation. To study this hypothesis, we used a hybrid quantum and classical

Indexed as

COVID-19Pulmonary SurfactantsAlgorithmsAmino AcidsAngiotensin-Converting Enzyme 2Computer SimulationHumansPeptidyl-Dipeptidase APulmonary Surfactant-Associated Protein ASARS-CoV-2Spike Glycoprotein, CoronavirusAmino AcidsAngiotensin-Converting Enzyme 2Peptidyl-Dipeptidase APulmonary Surfactant-Associated Protein APulmonary SurfactantsSpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2glycosylationimmunoprotectionin silicoMaxCutQAOAquantum computation (QC)SARS-CoV-2SP-A

Identifiers

PMID36189278
PMCPMC9519185
OpenAlexW4295720418

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.