Evidence map›Paper›PMID 36188220›Full record

ArticleFrontiers in molecular biosciences2022

A cuproptosis-related lncRNA signature identified prognosis and tumour immune microenvironment in kidney renal clear cell carcinoma.

Sheng Xin, Jiaquan Mao, Kai Cui, Qian Li, Liang Chen, Qinyu Li, Bocheng Tu, Xiaming Liu, Tao Wang, Shaogang Wang and 3 more

Abstract read
In one paragraph

Article in Frontiers in molecular biosciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Sheng XinDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Jiaquan MaoDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Kai CuiDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Qian LiDepartment of Orthopedics, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Liang ChenDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Qinyu LiDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Bocheng TuDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Xiaming LiuDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Tao WangDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Shaogang WangDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Jihong LiuDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Xiaodong SongDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.
Wen SongDepartment of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science & Technology, Wuhan, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Kidney renal clear cell carcinoma (KIRC) is a heterogeneous malignant tumor with high incidence, metastasis, and mortality. The imbalance of copper homeostasis can produce cytotoxicity and cause cell damage. At the same time, copper can also induce tumor cell death and inhibit tumor transformation. The latest research found that this copper-induced cell death is different from the known cell death pathway, so it is defined as cuproptosis. We included 539 KIRC samples and 72 normal tissues from the Cancer Genome Atlas (TCGA) in our study. After identifying long non-coding RNAs (lncRNAs) significantly associated with cuproptosis, we clustered 526 KIRC samples based on the prognostic lncRNAs and obtained two different patterns (Cuproptosis.C1 and C2). C1 indicated an obviously worse prognostic outcome and possessed a higher immune score and immune cell infiltration level. Moreover, a prognosis signature (CRGscore) was constructed to effectively and accurately evaluate the overall survival (OS) of KIRC patients. There were significant differences in tumor immune microenvironment (TIME) and tumor mutation burden (TMB) between CRGscore-defined groups. CRGscore also has the potential to predict medicine efficacy.

Indexed as

cuproptosiskidney renal clear cell carcinomalncRNAsprognostic signaturetumor immune microenvironment

Identifiers

PMID36188220
PMCPMC9515514

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.