Evidence map›Paper›PMID 36186087›Full record

ArticleIEEE signal processing magazine2022

Unsupervised Deep Learning Methods for Biological Image Reconstruction and Enhancement: An overview from a signal processing perspective.

Mehmet Akçakaya, Burhaneddin Yaman, Hyungjin Chung, Jong Chul Ye

Abstract read
In one paragraph

Article in IEEE signal processing magazine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed.

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  13. Missing Wedge Completion via Unsupervised Learning with Coordinate Networks.International journal of molecular sciences · 2024
    Article
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  16. CYCLE-CONSISTENT SELF-SUPERVISED LEARNING FOR IMPROVED HIGHLY-ACCELERATED MRI RECONSTRUCTION.Proceedings. IEEE International Symposium on Biomedical Imaging · 2024
    Article
  17. Article
  18. UNCERTAINTY-GUIDED PHYSICS-DRIVEN DEEP LEARNING RECONSTRUCTION VIA CYCLIC MEASUREMENT CONSISTENCY.Proceedings of the ... IEEE International Conference on Acoustics, Speech, and Signal Processing. ICASSP (Conference) · 2024
    Article
  19. Opportunities and Challenges in Applying AI to Evolutionary Morphology.Integrative organismal biology (Oxford, England) · 2024
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mehmet AkçakayaDepartment of Electrical and Computer Engineering, and Center for Magnetic Resonance Research, University of Minnesota, USA.
Burhaneddin YamanDepartment of Electrical and Computer Engineering, and Center for Magnetic Resonance Research, University of Minnesota, USA.
Hyungjin ChungDepartment of Bio and Brain Engineering, Korea Advanced Inst. of Science and Technology (KAIST), Korea.
Jong Chul YeDepartment of Bio and Brain Engineering, Korea Advanced Inst. of Science and Technology (KAIST), Korea.

Funding

TRD4 - Ultrahigh Field Engineering and SafetyP41EB027061 · NIBIB · UNIVERSITY OF MINNESOTA · PI Gregory John Metzger, KAMIL UGURBIL · 2019 to 2026
$11.7M
Rapid Comprehensive Cardiac MRI Exam for Diagnosis of Coronary Artery DiseaseR01HL153146 · NHLBI · UNIVERSITY OF MINNESOTA · PI AKCAKAYA, MEHMET · 2020 to 2024
$2.5M
Novel Quantitative MRI Techniques for the Assessment of Cardiac Fibrosis without Gadolinium ContrastR21EB028369 · NIBIB · UNIVERSITY OF MINNESOTA · PI AKCAKAYA, MEHMET · 2020 to 2022
$602k
NHLBI NIH HHS R01 HL153146NIBIB NIH HHS P41 EB027061NIBIB NIH HHS R21 EB028369
6 · The paper itself

Abstract

Recently, deep learning approaches have become the main research frontier for biological image reconstruction and enhancement problems thanks to their high performance, along with their ultra-fast inference times. However, due to the difficulty of obtaining matched reference data for supervised learning, there has been increasing interest in unsupervised learning approaches that do not need paired reference data. In particular, self-supervised learning and generative models have been successfully used for various biological imaging applications. In this paper, we overview these approaches from a coherent perspective in the context of classical inverse problems, and discuss their applications to biological imaging, including electron, fluorescence and deconvolution microscopy, optical diffraction tomography and functional neuroimaging.

Indexed as

biological imagingDeep learningimage reconstructionunsupervised learning

Identifiers

PMID36186087
PMCPMC9523517

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.