Evidence map›Paper›PMID 36186029›Full record

ArticleFrontiers in plant science2022

Whole-genome resequencing reveals the origin of tea in Lincang.

Yahui Lei, Ling Yang, Shengchang Duan, Siqi Ning, Dawei Li, Zijun Wang, Guisheng Xiang, Ling Yang, Chunping Wang, Shiyu Zhang and 6 more

Abstract read
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

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2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Methylation-associated mutagenesis underlies variation in the mutation spectrum across eukaryotes.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

16 authors.

Yahui LeiCollege of Food Science and Technology, Yunnan Agricultural University, Kunming, China.
Ling YangCollege of Food Science and Technology, Yunnan Agricultural University, Kunming, China.
Shengchang DuanNowbio Biotechnology Company, Kunming, China.
Siqi NingExperimental Middle School of Yunnan Normal University, Kunming, China.
Dawei LiYunnan Agricultural University Applied Genomics Technology Laboratory, School of Biological Big Data, Yunnan Agricultural University, Kunming, China.
Zijun WangYunnan Agricultural University Applied Genomics Technology Laboratory, School of Biological Big Data, Yunnan Agricultural University, Kunming, China.
Guisheng XiangYunnan Agricultural University Applied Genomics Technology Laboratory, School of Biological Big Data, Yunnan Agricultural University, Kunming, China.
Ling YangYunnan Agricultural University Applied Genomics Technology Laboratory, School of Biological Big Data, Yunnan Agricultural University, Kunming, China.
Chunping WangYunnan Agricultural University Applied Genomics Technology Laboratory, School of Biological Big Data, Yunnan Agricultural University, Kunming, China.
Shiyu ZhangYunnan Agricultural University Applied Genomics Technology Laboratory, School of Biological Big Data, Yunnan Agricultural University, Kunming, China.
Shuangyan ZhangYunnan Agricultural University Applied Genomics Technology Laboratory, School of Biological Big Data, Yunnan Agricultural University, Kunming, China.
Shuang YeYunnan Agricultural University Applied Genomics Technology Laboratory, School of Biological Big Data, Yunnan Agricultural University, Kunming, China.
Ling KuiShenzhen Qianhai Shekou Free Trade Zone Hospital, Shenzhen, China.
Pratiksha SinghState Key Laboratory of Non-Food Biomass and Enzyme Technology, Guangxi Academy of Sciences, Nanning, Guangxi, China.
Jun ShengState Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan Agricultural University, Kunming, China.
Yang DongState Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Yunnan Agricultural University, Kunming, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Phylogeographic, population genetics and diversity analysis are crucial for local tea resource conservation and breeding programs. Lincang in Yunnan has been known as the possible place of domestication for tea worldwide, yet, its genetic makeup and unique Lincang origin are little understood. Here, we reported a large-scale whole-genome resequencing based population genomic analysis in eight main tea-producing areas of Lincang in Yunnan (1,350 accessions), and the first comprehensive map of tea genome variation in Lincang was constructed. Based on the population structure, tea sample in Lincang was divided into three subgroups, and inferred Xigui and Nahan Tea Mountain in Linxiang, Baiying Mountain Ancient Tea Garden in Yun, and Jinxiu Village of Xiaowan Town in Fengqing, which belong to the birthplace of the three subgroups, were all likely to be the origin center of Lincang tea. Meanwhile, the history population sizes analysis show that similar evolutionary patterns were observed for the three subgroups of Lincang. It also was observed that the hybrid among eight areas of Lincang was noticeable, resulting in insignificant genetic differentiation between geographical populations and low genetic diversity. The findings of this study clarified the genetic make-up and evolutionary traits of the local population of tea, which gave some insight into the development of Lincang tea.

Indexed as

Camellia sinensisoriginpopulation structureSNPswhole genome re-sequencing

Identifiers

PMID36186029
PMCPMC9520660

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