Evidence map›Paper›PMID 36185680›Full record

ReviewFrontiers in nutrition2022

Probiotics, their action modality and the use of multi-omics in metamorphosis of commensal microbiota into target-based probiotics.

Maryam Idrees, Muhammad Imran, Naima Atiq, Rabaab Zahra, Rameesha Abid, Mousa Alreshidi, Tim Roberts, Abdelmuhsin Abdelgadir, Muhammad Khalid Tipu, Arshad Farid and 2 more

Abstract readReview
In one paragraph

Review in Frontiers in nutrition, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 1 synthesis or guideline pooled it.

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  17. Research advance in correlation between childhood asthma and gut microbiota.Frontiers in cellular and infection microbiology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Maryam IdreesDepartment of Microbiology, Quaid-i-Azam University, Islamabad, Pakistan.
Muhammad ImranDepartment of Microbiology, Quaid-i-Azam University, Islamabad, Pakistan.
Naima AtiqDepartment of Microbiology, Quaid-i-Azam University, Islamabad, Pakistan.
Rabaab ZahraDepartment of Microbiology, Quaid-i-Azam University, Islamabad, Pakistan.
Rameesha AbidNational Agricultural Research Centre (NARC), National Institute for Genomics and Advanced Biotechnology (NIGAB), Islamabad, Pakistan.
Mousa AlreshidiDepartment of Biology, College of Science, University of Hail, Hail, Saudi Arabia.
Tim RobertsMetabolic Research Group, Faculty of Science, School of Environmental and Life Sciences, The University of Newcastle, University Drive, Callaghan, NSW, Australia.
Abdelmuhsin AbdelgadirDepartment of Biology, College of Science, University of Hail, Hail, Saudi Arabia.
Muhammad Khalid TipuDepartment of Pharmacy, Quaid-i-Azam University, Islamabad, Pakistan.
Arshad FaridGomal Center of Biochemistry and Biotechnology, Gomal University, Dera Ismail Khan, Pakistan.
Oluwaseyi Abraham OlawaleGenomics Research Hub (GENOMAC HUB), Ogbomoso, Nigeria.
Shakira GhazanfarNational Agricultural Research Centre (NARC), National Institute for Genomics and Advanced Biotechnology (NIGAB), Islamabad, Pakistan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This review article addresses the strategic formulation of human probiotics and allows the reader to walk along the journey that metamorphoses commensal microbiota into target-based probiotics. It recapitulates what are probiotics, their history, and the main mechanisms through which probiotics exert beneficial effects on the host. It articulates how a given probiotic preparation could not be all-encompassing and how each probiotic strain has its unique repertoire of functional genes. It answers what criteria should be met to formulate probiotics intended for human use, and why certain probiotics meet ill-fate in pre-clinical and clinical trials? It communicates the reasons that taint the reputation of probiotics and cause discord between the industry, medical and scientific communities. It revisits the notion of host-adapted strains carrying niche-specific genetic modifications. Lastly, this paper emphasizes the strategic development of target-based probiotics using host-adapted microbial isolates with known molecular effectors that would serve as better candidates for bioprophylactic and biotherapeutic interventions in disease-susceptible individuals.

Indexed as

bioprophylacticsbiotherapeuticshost-adapted strainshuman probiotics formulationlactic acid bacteriamulti-omicstarget-based probiotics

Identifiers

PMID36185680
PMCPMC9523698

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.