Evidence map›Paper›PMID 36181511›Full record

ArticleAnalytical and bioanalytical chemistry2022

Evaluation of absorbent cotton for glycopeptide enrichment.

Miaomiao Xin, Shanshan You, Jingyu Wu, Yintai Xu, Cheng Li, Bojing Zhu, Jiechen Shen, Zexuan Chen, Liuyi Dang, Wei Dan and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Analytical and bioanalytical chemistry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Miaomiao XinCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China.
Shanshan YouCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China.
Jingyu WuCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China.
Yintai XuCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China.
Cheng LiCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China.
Bojing ZhuCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China.
Jiechen ShenCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China.
Zexuan ChenCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China.
Liuyi DangCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China.
Wei DanCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China.
Xinwen ZhangDepartment of Medical Genetics, Xi'an Fourth Hospital, Xi'an, Shaanxi Province, 710004, People's Republic of China.
Shisheng SunCollege of Life Science, Northwest University, Xi'an, Shaanxi Province, 710069, People's Republic of China. suns@nwu.edu.cn.ORCID http://orcid.org/0000-0002-7242-7164
Northwest University · CNThe Fourth People's Hospital · CNUniversity of South Bohemia in České Budějovice · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Selecting proper and efficient glycopeptide enrichment approaches are essential for mass spectrometry-based glycoproteomics since glycopeptides are usually with microheterogeneity and low abundance in most biological samples. Herein, we introduced a cotton hydrophilic interaction liquid chromatography (HILIC) approach for large-scale glycopeptide enrichment with 80% acetonitrile/1% trifluoroacetic acid as the optimal sample loading buffer. The comparison of cotton HILIC with Venusil HILIC and mixed anion-exchange (MAX) approaches indicated that cotton HILIC was superior in overall glycopeptide enrichment, whereas Venusil HILIC preferred in complex glycan structures and MAX performed better with high mannose glycans. Exploration of capacity and recovery rate of cotton HILIC illustrated that 5mg cotton packed in a 200μL tip achieved a reasonable glycopeptide enrichment performance (~6% recovery) from ~0.5mg peptides. In conclusion, cotton HILIC can be used as an optional glycopeptide enrichment approach in glycosylation analysis with its specific merit.

Indexed as

GlycopeptidesPolysaccharidesChromatography, LiquidGlycosylationHydrophobic and Hydrophilic InteractionsGlycopeptidesPolysaccharidesAbsorbent cottonEnrichmentGlycopeptideHILICMass spectrometryMAX

Identifiers

PMID36181511
OpenAlexW4298326504

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.