Evidence map›Paper›PMID 36180603›Full record

ReviewNature reviews. Molecular cell biology2023

Genomic regulation of transcription and RNA processing by the multitasking Integrator complex.

Sarah A Welsh, Alessandro Gardini

Open access · greenAbstract readReview
In one paragraph

Review in Nature reviews. Molecular cell biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 1 pooled it
7.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 1 synthesis or guideline pooled it, 84 citations in OpenAlex.

  1. A novel regulator in cancer initiation and progression: long noncoding RNA SHNG9.Clinical & translational oncology : official publication of the Federation of Spanish Oncology Societies and of the National Cancer Institute of Mexico · 2023
    Pooled it
  2. Article
  3. Review
  4. Article
  5. Structure of cytoplasmic RNA polymerase II.Nature communications · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. RNA damage signaling primes transcription-coupled repair.Nature structural & molecular biology · 2026
    Article
  10. Maternal IntS11 primes embryonic totipotency by organizing early zygotic transcription initiation.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  11. Article
  12. Article
  13. What makes genes burst.Trends in cell biology · 2026
    Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Sarah A WelshThe Wistar Institute, Philadelphia, PA, USA.
Alessandro GardiniThe Wistar Institute, Philadelphia, PA, USA. agardini@wistar.org.ORCID 0000-0003-0413-2855
The Wistar Institute · US

Funding

Role of an Integrator-EGR axis in the regulation of myeloid enhancers (Admin Supp)R01HL141326 · NHLBI · WISTAR INSTITUTE · PI GARDINI, ALESSANDRO · 2019 to 2023
$2.7M
Mechanisms of Epigenetic Plasticity in PDACR01CA252223 · NCI · GEORGETOWN UNIVERSITY · PI YI, CHUNLING · 2021 to 2025
$2.4M
NCI NIH HHS R01 CA252223NHLBI NIH HHS R01 HL141326
6 · The paper itself

Abstract

In higher eukaryotes, fine-tuned activation of protein-coding genes and many non-coding RNAs pivots around the regulated activity of RNA polymerase II (Pol II). The Integrator complex is the only Pol II-associated large multiprotein complex that is metazoan specific, and has therefore been understudied for years. Integrator comprises at least 14 subunits, which are grouped into distinct functional modules. The phosphodiesterase activity of the core catalytic module is co-transcriptionally directed against several RNA species, including long non-coding RNAs (lncRNAs), U small nuclear RNAs (U snRNAs), PIWI-interacting RNAs (piRNAs), enhancer RNAs and nascent pre-mRNAs. Processing of non-coding RNAs by Integrator is essential for their biogenesis, and at protein-coding genes, Integrator is a key modulator of Pol II promoter-proximal pausing and transcript elongation. Recent studies have identified an Integrator-specific serine/threonine-protein phosphatase 2A (PP2A) module, which targets Pol II and other components of the basal transcription machinery. In this Review, we discuss how the activity of Integrator regulates transcription, RNA processing, chromatin landscape and DNA repair. We also discuss the diverse roles of Integrator in development and tumorigenesis.

Indexed as

RNA Polymerase IIRNA Processing, Post-TranscriptionalAnimalsGenomicsRNARNA, Small NuclearTranscription, GeneticRNARNA Polymerase IIRNA, Small Nuclear

Identifiers

PMID36180603
PMCPMC9974566
OpenAlexW4298119357

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.