Evidence map›Paper›PMID 36180068›Full record

ArticleThorax2023

Admixture mapping of severe asthma exacerbations in Hispanic/Latino children and youth.

Esther Herrera-Luis, Angel C Y Mak, Javier Perez-Garcia, Elena Martin-Gonzalez, Celeste Eng, Kenneth B Beckman, Scott Huntsman, Donglei Hu, Ruperto González-Pérez, José M Hernández-Pérez and 26 more

Open access · greenAbstract read
In one paragraph

Article in Thorax, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Update on the genetics of allergic diseases.The Journal of allergy and clinical immunology · 2025
    Review
  5. Review
  6. Article
  7. Asthma-Genomic Advances Toward Risk Prediction.Clinics in chest medicine · 2024
    Review
  8. Article
  9. Genes · 2024
    Article
  10. Article
  11. Review
  12. Review
  13. Asthma Exacerbations: The Genes Behind the Scenes.Journal of investigational allergology & clinical immunology · 2023
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

36 authors at 17 institutions in 5 countries.

Esther Herrera-LuisGenomics and Health Group, Department of Biochemistry, Microbiology, Cell Biology, and Genetics, Universidad de La Laguna (ULL), La Laguna, Spain.ORCID 0000-0003-4150-5454
Angel C Y MakDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Javier Perez-GarciaGenomics and Health Group, Department of Biochemistry, Microbiology, Cell Biology, and Genetics, Universidad de La Laguna (ULL), La Laguna, Spain.ORCID 0000-0001-7813-4381
Elena Martin-GonzalezGenomics and Health Group, Department of Biochemistry, Microbiology, Cell Biology, and Genetics, Universidad de La Laguna (ULL), La Laguna, Spain.ORCID 0000-0002-3522-3103
Celeste EngDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Kenneth B BeckmanUniversity of Minnesota Genomics Center, Minneapolis, Minnesota, USA.
Scott HuntsmanDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Donglei HuDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Ruperto González-PérezAllergy Department, Hospital Universitario de Canarias, La Laguna, Spain.
José M Hernández-PérezPulmonary Medicine, Hospital Universitario N.S. de Candelaria, Santa Cruz de Tenerife, Spain.
Elena Mederos-LuisAllergy Department, Hospital Universitario de Canarias, La Laguna, Spain.
Yang Yie SioDepartment of Biological Sciences, National University of Singapore, Singapore.
Paloma Poza-GuedesAllergy Department, Hospital Universitario de Canarias, La Laguna, Spain.
Olaia SardónDivision of Pediatric Respiratory Medicine, Hospital Universitario Donostia, San Sebastián, Spain.
Paula CorcueraDivision of Pediatric Respiratory Medicine, Hospital Universitario Donostia, San Sebastián, Spain.
Inmaculada Sánchez-MachínAllergy Department, Hospital Universitario de Canarias, La Laguna, Spain.
Javier Korta-MuruaDivision of Pediatric Respiratory Medicine, Hospital Universitario Donostia, San Sebastián, Spain.
Carlos Martínez-RiveraServicio de Neumología, Hospital Universitario Germans Trias i Pujol, Universitat Autònoma de Barcelona, Badalona, Spain.
Joaquim MullolCIBER de Enfermedades Respiratorias, Instituto de Salud Carlos III, Madrid, Spain.
Xavier MuñozCIBER de Enfermedades Respiratorias, Instituto de Salud Carlos III, Madrid, Spain.
Antonio ValeroCIBER de Enfermedades Respiratorias, Instituto de Salud Carlos III, Madrid, Spain.
Joaquin SastreCIBER de Enfermedades Respiratorias, Instituto de Salud Carlos III, Madrid, Spain.
Judith Garcia-AymerichSpanish Consortium for Research on Epidemiology and Public Health (CIBERESP), Madrid, Spain.ORCID 0000-0002-7097-4586
Sabrina LlopSpanish Consortium for Research on Epidemiology and Public Health (CIBERESP), Madrid, Spain.
Maties TorrentIb-salut, Area de Salut de Menorca, Menorca, Spain.
Maribel CasasISGlobal, Barcelona, Spain.ORCID 0000-0002-2112-6740
José R Rodríguez-SantanaCentro de Neumología Pediátrica, San Juan, Puerto Rico.
Jesús VillarCIBER de Enfermedades Respiratorias, Instituto de Salud Carlos III, Madrid, Spain.
Victoria Del PozoCIBER de Enfermedades Respiratorias, Instituto de Salud Carlos III, Madrid, Spain.
Fabian Lorenzo-DiazGenomics and Health Group, Department of Biochemistry, Microbiology, Cell Biology, and Genetics, Universidad de La Laguna (ULL), La Laguna, Spain.ORCID 0000-0002-3398-198X
L Keoki WilliamsCenter for Individualized and Genomic Medicine Research, Department of Internal Medicine, Henry Ford Health System, Detroit, Michigan, USA.
Erik MelénDepartment of Clinical Sciences and Education, Södersjukhuset, Karolinska Institutet, Stockholm, Sweden.
Fook Tim ChewDepartment of Biological Sciences, National University of Singapore, Singapore.ORCID 0000-0003-1337-5146
Luisa N BorrellDepartment of Epidemiology & Biostatistics, Graduate School of Public Health & Health Policy, City University of New York, New York, New York, USA.
Esteban G BurchardDepartment of Medicine, University of California San Francisco, San Francisco, California, USA.
Maria Pino-YanesGenomics and Health Group, Department of Biochemistry, Microbiology, Cell Biology, and Genetics, Universidad de La Laguna (ULL), La Laguna, Spain mdelpino@ull.edu.es.ORCID 0000-0003-0332-437X
Instituto de Salud Carlos III · ESUniversidad de La Laguna · ESUniversity of California, San Francisco · USHospital Universitario de Canarias · ESNational University of Singapore · SGUniversitat Pompeu Fabra · ESUniversity of the Basque Country · ESBiogipuzkoa Health Research Institute · ESCentro de Neumologia Pediatrica · PRCity University of New York · USHenry Ford Health System · USHospital Universitario Nuestra Señora de Candelaria · ESKarolinska Institutet · SEParc de Salut · ESUniversitat Autònoma de Barcelona · ESUniversitat Jaume I · ESUniversity of Minnesota · US

Funding

New York Center for Collaborative Research In Common Disease Genomics: Genome Aggregation and Joint Variant Calling for CCDG Freeze2UM1HG008901 · NHGRI · NEW YORK GENOME CENTER · PI MANIATIS, THOMAS P, WIGLER, MICHAEL H · 2016 to 2020
$56.6M
Studies of Rare Genetic Variation in the Isolated Population of SardiniaR01HL117626 · NHLBI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI ABECASIS, GONCALO · 2013 to 2016
$10.5M
The Airway Functional Genomics of Bronchodilator Drug Response in Minority Children with AsthmaR01HL117004 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI AHITUV, NADAV, SEIBOLD, MAX A · 2013 to 2022
$9.3M
Rare variants and NHLBI traits in deeply phenotyped cohortsR01HL120393 · NHLBI · UNIVERSITY OF WASHINGTON · PI PSATY, BRUCE M, RICE, KENNETH M. · 2014 to 2016
$8.9M
Gene-environments and Admixture in Latino Asthmatics (GALA 2)R01ES015794 · NIEHS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BURCHARD, ESTEBAN GONZALEZ · 2008 to 2012
$5.4M
NHGRI Genome Sequencing Program Coordinating CenterU24HG008956 · NHGRI · RUTGERS, THE STATE UNIV OF N.J. · PI BUYSKE, STEVEN G, MATISE, TARA C. · 2016 to 2020
$4.9M
Transcriptomic and Pharmacogenetic Asthma Endotypes in Minority ChildrenR01HL135156 · NHLBI · NATIONAL JEWISH HEALTH · PI SEIBOLD, MAX A, ZIV, ELAD · 2017 to 2021
$4.1M
PHARMACOGENOMICS OF INHALED CORTICOSTEROID RESPONSIVENESS IN PATIENTS WITH ASTHMAR01AI079139 · NIAID · HENRY FORD HEALTH SYSTEM · PI WILLIAMS, KEOKI · 2009 to 2013
$3.9M
Genes, air pollution, and asthma severity in minority childrenR01MD010443 · NIMHD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SEIBOLD, MAX A, ZIV, ELAD · 2016 to 2020
$3.8M
Leveraging electronic medical records to perform large-scale diabetes pharmacogenomics among ancestrally diverse patient populationsR01DK113003 · NIDDK · HENRY FORD HEALTH SYSTEM · PI WILLIAMS, KEOKI · 2017 to 2021
$3.2M
Genetic Control of Airway Epithelium Gene Expression in Childhood AsthmaticsR01HL128439 · NHLBI · NATIONAL JEWISH HEALTH · PI SEIBOLD, MAX A · 2015 to 2019
$3.1M
Poly-omic Study of Asthma Exacerbations in Diverse PopulationsR01HL141845 · NHLBI · HENRY FORD HEALTH SYSTEM · PI WILLIAMS, KEOKI · 2019 to 2022
$3.0M
NHGRI NIH HHS U24 HG008956NHGRI NIH HHS UM1 HG008901NHLBI NIH HHS R01 HL117004NHLBI NIH HHS R01 HL117626NHLBI NIH HHS R01 HL118267NHLBI NIH HHS R01 HL120393NHLBI NIH HHS R01 HL128439NHLBI NIH HHS R01 HL135156NHLBI NIH HHS R01 HL141845NHLBI NIH HHS R01 HL155024NIAID NIH HHS R01 AI079139NIDDK NIH HHS R01 DK113003NIEHS NIH HHS R01 ES015794NIEHS NIH HHS R21 ES024844NIMHD NIH HHS R01 MD010443NIMHD NIH HHS R56 MD013312
6 · The paper itself

Abstract

backgroundIn the USA, genetically admixed populations have the highest asthma prevalence and severe asthma exacerbations rates. This could be explained not only by environmental factors but also by genetic variants that exert ethnic-specific effects. However, no admixture mapping has been performed for severe asthma exacerbations.

objectiveWe sought to identify genetic variants associated with severe asthma exacerbations in Hispanic/Latino subgroups by means of admixture mapping analyses and fine mapping, and to assess their transferability to other populations and potential functional roles.

methodsWe performed an admixture mapping in 1124 Puerto Rican and 625 Mexican American children with asthma. Fine-mapping of the significant peaks was performed via allelic testing of common and rare variants. We performed replication across Hispanic/Latino subgroups, and the transferability to non-Hispanic/Latino populations was assessed in 1001 African Americans, 1250 Singaporeans and 941 Europeans with asthma. The effects of the variants on gene expression and DNA methylation from whole blood were also evaluated in participants with asthma and in silico with data obtained through public databases.

resultsGenomewide significant associations of Indigenous American ancestry with severe asthma exacerbations were found at 5q32 in Mexican Americans as well as at 13q13-q13.2 and 3p13 in Puerto Ricans. The single nucleotide polymorphism (SNP) rs1144986 (

conclusionsAdmixture mapping study of asthma exacerbations revealed a novel locus that exhibited Hispanic/Latino-specific effects and regulated

Indexed as

AsthmaHispanic or LatinoAdolescentChildGenome-Wide Association StudyHumansMexican AmericansPolymorphism, Single NucleotideUnited StatesAsthmaAsthma GeneticsPaediatric asthmaPaediatric Lung Disaese

Identifiers

PMID36180068
PMCPMC9957797
OpenAlexW4298132444

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.