Evidence map›Paper›PMID 36179369›Full record

ArticleThe Journal of cell biology2022

Stress granules and mTOR are regulated by membrane atg8ylation during lysosomal damage.

Jingyue Jia, Fulong Wang, Zambarlal Bhujabal, Ryan Peters, Michal Mudd, Thabata Duque, Lee Allers, Ruheena Javed, Michelle Salemi, Christian Behrends and 3 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed
12.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 85 citations in OpenAlex.

  1. Review
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  10. Autophagy · 2026
    Review
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  15. Review
  16. Autophagy · 2026
    Article
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10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 3 countries.

Jingyue JiaAutophagy, Inflammation and Metabolism Center of Biochemical Research Excellence, Albuquerque, NM.
Fulong WangAutophagy, Inflammation and Metabolism Center of Biochemical Research Excellence, Albuquerque, NM.
Zambarlal BhujabalAutophagy Research Group, Institute of Medical Biology, UiT The Arctic University of Norway, Tromsø, Norway.ORCID 0000-0002-6001-5488
Ryan PetersAutophagy, Inflammation and Metabolism Center of Biochemical Research Excellence, Albuquerque, NM.
Michal MuddAutophagy, Inflammation and Metabolism Center of Biochemical Research Excellence, Albuquerque, NM.
Thabata DuqueAutophagy, Inflammation and Metabolism Center of Biochemical Research Excellence, Albuquerque, NM.ORCID 0000-0001-8922-3822
Lee AllersAutophagy, Inflammation and Metabolism Center of Biochemical Research Excellence, Albuquerque, NM.
Ruheena JavedAutophagy, Inflammation and Metabolism Center of Biochemical Research Excellence, Albuquerque, NM.
Michelle SalemiProteomics Core Facility, University of California Davis Genome Center, University of California, Davis, Davis, CA.
Christian BehrendsMunich Cluster of Systems Neurology, Ludwig-Maximilians-Universität München, München, Germany.ORCID 0000-0002-9184-7607
Brett PhinneyProteomics Core Facility, University of California Davis Genome Center, University of California, Davis, Davis, CA.ORCID 0000-0003-3870-3302
Terje JohansenAutophagy Research Group, Institute of Medical Biology, UiT The Arctic University of Norway, Tromsø, Norway.ORCID 0000-0003-1451-9578
Vojo DereticAutophagy, Inflammation and Metabolism Center of Biochemical Research Excellence, Albuquerque, NM.ORCID 0000-0002-3624-5208
University of New Mexico · USUiT The Arctic University of Norway · NOUniversity of California, Davis · USMunich Cluster for Systems Neurology · DE

Funding

Unfolded Protein Response and Autophagy in T Helper Cell Effector FunctionP20GM121176 · NIGMS · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI VOJO P DERETIC · 2017 to 2026
$24.9M
Autophagy Against Tuberculosis and HIVR01AI111935 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI DERETIC, VOJO P · 2014 to 2023
$7.0M
Pattern Recognition Receptors and Autophagy in Mtb Control in AIDSR37AI042999 · NIAID · UNIVERSITY OF NEW MEXICO HEALTH SCIS CTR · PI VOJO P DERETIC · 2018 to 2026
$4.7M
Phinney - Orbitrap Fusion ETDS10OD021801 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI PHINNEY, BRETT S · 2016 to 2016
$600k
NIAID NIH HHS R01 AI111935NIAID NIH HHS R37 AI042999NIGMS NIH HHS P20 GM121176NIH HHS S10 OD021801
6 · The paper itself

Abstract

We report that lysosomal damage is a hitherto unknown inducer of stress granule (SG) formation and that the process termed membrane atg8ylation coordinates SG formation with mTOR inactivation during lysosomal stress. SGs were induced by lysosome-damaging agents including SARS-CoV-2ORF3a, Mycobacterium tuberculosis, and proteopathic tau. During damage, mammalian ATG8s directly interacted with the core SG proteins NUFIP2 and G3BP1. Atg8ylation was needed for their recruitment to damaged lysosomes independently of SG condensates whereupon NUFIP2 contributed to mTOR inactivation via the Ragulator-RagA/B complex. Thus, cells employ membrane atg8ylation to control and coordinate SG and mTOR responses to lysosomal damage.

Indexed as

DNA HelicasesRNA HelicasesAnimalsAutophagy-Related Protein 8 FamilyCytoplasmic GranulesLysosomesMammalsPoly-ADP-Ribose Binding ProteinsRNA Recognition Motif ProteinsStress GranulesTOR Serine-Threonine KinasesAutophagy-Related Protein 8 FamilyDNA HelicasesPoly-ADP-Ribose Binding ProteinsRNA HelicasesRNA Recognition Motif ProteinsTOR Serine-Threonine Kinases

Identifiers

PMID36179369
PMCPMC9533235
OpenAlexW4298109667

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.