Evidence map›Paper›PMID 36178799›Full record

ArticleACS synthetic biology2022

Synonymous Codons and Hydrophobicity Optimization of Post-translational Signal Peptide PelB Increase Phage Display Efficiency of DARPins.

Antti Kulmala, Matias Lappalainen, Urpo Lamminmäki, Tuomas Huovinen

Open access · hybridAbstract read
In one paragraph

Article in ACS synthetic biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 5 citations in OpenAlex.

  1. mBio · 2026
    Article
  2. bioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Antti KulmalaDepartment of Life Technologies, University of Turku Kiinamyllynkatu 10, 20520 Turku, Finland.
Matias LappalainenDepartment of Life Technologies, University of Turku Kiinamyllynkatu 10, 20520 Turku, Finland.
Urpo LamminmäkiDepartment of Life Technologies, University of Turku Kiinamyllynkatu 10, 20520 Turku, Finland.
Tuomas HuovinenDepartment of Life Technologies, University of Turku Kiinamyllynkatu 10, 20520 Turku, Finland.ORCID 0000-0003-0960-3249
University of Turku · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DsbA leader peptide targets proteins for cotranslational translocation by signal recognition particle (SRP) pathway and has been the standard signal sequence for filamentous phage display of fast-folding Designed Ankyrin Repeat Proteins (DARPins). In contrast, translocation of DARPins via the post-translational pathway, for example, with the commonly used PelB leader, has been reported to be highly inefficient. In this study, two PelB signal sequence libraries were screened covering different regions of the leader peptide for identifying mutants with improved display of DARPins on phage. A PelB variant with the most favorable combination of synonymous mutations in the n-region and hydrophobic substitutions in the h-region increased the display efficiency of a DARPin library 44- and 12-fold compared to PelB

Indexed as

BacteriophagesProtein Sorting SignalsCodonDesigned Ankyrin Repeat ProteinsHydrophobic and Hydrophilic InteractionsPeptide LibrarySignal Recognition ParticleThioredoxinsValineCodonDesigned Ankyrin Repeat ProteinsPeptide LibraryProtein Sorting SignalsSignal Recognition ParticleThioredoxinsValineDARPinperiplasmic expressionphage displayprotein engineeringsignal sequencesynonymous codons

Identifiers

PMID36178799
PMCPMC9594773
OpenAlexW4298086644

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.