Evidence map›Paper›PMID 36176741›Full record

ArticleComputational and mathematical methods in medicine2022

PLK4 Is a Potential Biomarker for Abnormal Tumor Proliferation, Immune Infiltration, and Prognosis in ccRCC.

Chenglu Hu, Qingping Liu, Chengyi Hu, Ying Wang, Pan Wang, Xing Zhou

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Article in Computational and mathematical methods in medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Chenglu HuSchool of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing 400054, China.ORCID https://orcid.org/0000-0001-7045-7469
Qingping LiuSchool of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing 400054, China.ORCID https://orcid.org/0000-0002-5515-7115
Chengyi HuSchool of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing 400054, China.ORCID https://orcid.org/0000-0002-0503-0992
Ying WangSchool of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing 400054, China.ORCID https://orcid.org/0000-0003-3328-417X
Pan WangSchool of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing 400054, China.ORCID https://orcid.org/0000-0003-2617-1695
Xing ZhouSchool of Pharmacy and Bioengineering, Chongqing University of Technology, Chongqing 400054, China.ORCID https://orcid.org/0000-0003-0852-0687
Chongqing University of Technology · CNFirst People's Hospital of Chongqing · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: PLK4 is highly expressed and associated with poor prognosis in various malignancies. However, the role of PLK4 in clear cell renal cell carcinoma (ccRCC) is still unclear. This study is aimed at analyzing the expression, the potential regulating mechanism, and the role of PLK4 in the ccRCC by bioinformatics. Methods: PLK4 mRNA expression data and methylation levels in ccRCC were examined using TIMER, UALCAN, MethSurv, NCBI-GEO, and UCSC databases. Quantitative real-time PCR verifies the regulatory relationship between PLK4 and has-miR-214-3p. The GEPIA2 and STRING databases were used to find similar genes of PLK4 and then enriched with Results: PLK4 mRNA expression levels were significantly higher in ccRCC tissues than in paracancerous tissues. ccRCC tissues had lower DNA methylation levels of PLK4 than normal tissues. Importantly, the high PLK4 expression was associated with poor prognosis in ccRCC patients. The has-miR-214-3p negatively regulates the expression of PLK4. GO and KEGG pathway analysis showed that PLK4 coexpressed genes were mainly associated with multiple immune-related pathways, including cytokinesis, sister chromatid adhesions, and mitotic nuclear division. Our data suggest that the PLK4 expression is closely related to the level of immune infiltration and the cytokines that exert immune suppression, and IPS was significantly higher in the PLK4 low expression group. Conclusion: The PLK4 expression is associated with the prognosis of ccRCC patients and affects the immune microenvironment of ccRCC, and PLK4 is expected to be a new target for the diagnosis and treatment of ccRCC.

Indexed as

Carcinoma, Renal CellKidney NeoplasmsMicroRNAsBiomarkers, TumorCell Line, TumorCell ProliferationCytokinesGene Expression Regulation, NeoplasticHumansPrognosisProtein Serine-Threonine KinasesRNA, MessengerTumor MicroenvironmentBiomarkers, TumorCytokinesMicroRNAsMIRN214 microRNA, humanPLK4 protein, humanProtein Serine-Threonine KinasesRNA, Messenger

Identifiers

PMID36176741
PMCPMC9514917
OpenAlexW4296493376

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.