Evidence map›Paper›PMID 36175807›Full record

ArticleMedical oncology (Northwood, London, England)2022

Tissue proteome analysis revealed an association between cancer, immune system response, and the idiopathic granulomatous mastitis.

Merve Gulsen Bal Albayrak, Turgay Simsek, Murat Kasap, Gurler Akpinar, Nuh Zafer Canturk, Sertac Ata Guler

Abstract read
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In one paragraph

Article in Medical oncology (Northwood, London, England), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 29 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Merve Gulsen Bal AlbayrakDepartment of Medical Biology, Medical School, Kocaeli University, 41001, Kocaeli, Turkey.
Turgay SimsekDepartment of General Surgery, Medical School, Kocaeli University, 41001, Kocaeli, Turkey.
Murat KasapDepartment of Medical Biology, Medical School, Kocaeli University, 41001, Kocaeli, Turkey.
Gurler AkpinarDepartment of Medical Biology, Medical School, Kocaeli University, 41001, Kocaeli, Turkey. gurlerak@yahoo.com.ORCID http://orcid.org/0000-0002-9675-3714
Nuh Zafer CanturkDepartment of General Surgery, Medical School, Kocaeli University, 41001, Kocaeli, Turkey.
Sertac Ata GulerDepartment of General Surgery, Medical School, Kocaeli University, 41001, Kocaeli, Turkey.
Kocaeli Üniversitesi · TR

Funding

Kocaeli Üniversitesi 2019/092
6 · The paper itself

Abstract

Idiopathic Granulomatous Mastitis (IGM) is a disease that clinically mimics breast cancers with symptoms of pain, edema, erythema, nipple discharge, nipple retraction, and fistula. Although IGM is considered to be formed by autoimmune responses or infections, the molecular mechanism behind formation and progress is unknown. Therefore, in this study, we aimed to investigate molecular mechanisms underlying IGM formation, progress, and recurrence by monitoring the changes at the proteome level. Protein extracts prepared from IGM (n = 15) and within-control tissues (n = 15) were subjected to nHPLC followed by LC-MS/MS proteomic analysis. Label-free quantitation analysis revealed that sixty differentially regulated between the two groups. Those proteins were classified based on their role in metabolic pathways using bioinformatics tools. Based on DAVID analysis, 16 of the differently regulated proteins were associated with the immune system, while 17 proteins were involved in cancer metabolism. STRING analysis showed that five of the differentially regulated proteins were associated with combined immune deficiency which were PNP, TAP1, ITGAL, PRKDC, and PTPRC while the other proteins were involved in insulin response and neutrophil degranulation. This study is one of the very few studies that investigated the changes in protein expressions of IGM tissues compared to controls. For the first time, we have shown the relationship of IGM with the immune system at the protein level and also underlined the cancer-like behavior of the disease. Furthermore, the proteins that were pointed out as combined immune deficiency-related proteins may have value as diagnostic markers for idiopathic granulomatous mastitis although further studies are needed to shed more light on the pathogenesis of the disease.

Indexed as

Breast NeoplasmsGranulomatous MastitisInsulinsChromatography, LiquidFemaleHumansImmune SystemImmunoglobulin MProteomeProteomicsTandem Mass SpectrometryImmunoglobulin MInsulinsProteomeBreast cancerIGMImmunityLC–MS/MSMastitisProteomics

Identifiers

PMID36175807
OpenAlexW4297983328

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.