Evidence map›Paper›PMID 36174646›Full record

ArticleNature2022

Viruses inhibit TIR gcADPR signalling to overcome bacterial defence.

Azita Leavitt, Erez Yirmiya, Gil Amitai, Allen Lu, Jeremy Garb, Ehud Herbst, Benjamin R Morehouse, Samuel J Hobbs, Sadie P Antine, Zhen-Yu J Sun and 2 more

Abstract read
PubMed Publisher
In one paragraph

Article in Nature, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed
23.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 152 citations in OpenAlex.

  1. Revisiting the life cycle of temperate phages.Nature reviews. Microbiology · 2026
    Review
  2. Review
  3. Article
  4. Mechanisms and balanced regulation of plant immunity.Nature reviews. Molecular cell biology · 2026
    Review
  5. Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Balancing of immune activation and suppression during phage infection.bioRxiv : the preprint server for biology · 2026
    Article
  11. Article
  12. Phage RyR-domain proteins degrade ADPR-based immune signals and fuel NADbioRxiv : the preprint server for biology · 2026
    Article
  13. Article
  14. Characterization of defensome genes and mobile genetic Elements in different types of pasture soil agroecosystems from the Brazilian Amazon.International microbiology : the official journal of the Spanish Society for Microbiology · 2026
    Article
  15. Article
  16. Article
  17. TIR-like NADases act in bacterial immunity and the RNA vault.bioRxiv : the preprint server for biology · 2026
    Article
  18. Article
  19. Article
  20. Article

37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 2 countries.

Azita Leavitt *Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Erez Yirmiya *Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Gil Amitai *Department of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.ORCID http://orcid.org/0000-0002-2954-2503
Allen Lu *Department of Microbiology, Harvard Medical School, Boston, MA, USA.
Jeremy GarbDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Ehud HerbstDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel.
Benjamin R MorehouseDepartment of Microbiology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-3352-5463
Samuel J HobbsDepartment of Microbiology, Harvard Medical School, Boston, MA, USA.
Sadie P AntineDepartment of Microbiology, Harvard Medical School, Boston, MA, USA.ORCID http://orcid.org/0000-0003-0843-2986
Zhen-Yu J SunDepartment of Cancer Biology, Dana-Farber Cancer Institute, Boston, MA, USA.ORCID http://orcid.org/0000-0001-7527-6026
Philip J KranzuschDepartment of Microbiology, Harvard Medical School, Boston, MA, USA. philip_kranzusch@dfci.harvard.edu.ORCID http://orcid.org/0000-0002-4943-733X
Rotem SorekDepartment of Molecular Genetics, Weizmann Institute of Science, Rehovot, Israel. rotem.sorek@weizmann.ac.il.ORCID http://orcid.org/0000-0002-3872-4982
Weizmann Institute of Science · ILHarvard University · USDana-Farber Cancer Institute · US

Funding

User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI Frank V Murphy · 2018 to 2026
$34.2M
Pixel Array Detector for Macromolecular CrystallographyS10OD021527 · OD · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2016 to 2016
$2.0M
Pixel Array Detector for X-ray CrystallographyS10RR029205 · NCRR · CORNELL UNIVERSITY · PI EALICK, STEVEN E · 2010 to 2010
$1.8M
Mechanism of activation of a new cGAS-like enzyme in humansF32GM133063 · NIGMS · DANA-FARBER CANCER INST · PI MOREHOUSE, BENJAMIN ROBERT · 2019 to 2020
$127k
European Research Council ERC-ADG GA 101018520NCRR NIH HHS S10 RR029205NIGMS NIH HHS F32 GM133063NIGMS NIH HHS P30 GM124165NIH HHS S10 OD021527
6 · The paper itself

Abstract

The Toll/interleukin-1 receptor (TIR) domain is a key component of immune receptors that identify pathogen invasion in bacteria, plants and animals

Indexed as

BacteriaBacteriophagesProtein DomainsReceptors, Interleukin-1Signal TransductionToll-Like ReceptorsViral ProteinsBacterial ProteinsCrystallography, X-RayPlant ProteinsBacterial ProteinsPlant ProteinsReceptors, Interleukin-1Toll-Like ReceptorsViral Proteins

Identifiers

PMID36174646
OpenAlexW4297996539

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.