Evidence map›Paper›PMID 36174129›Full record

ArticleThe journal of physical chemistry letters2022

Free Gangliosides Can Alter Amyloid-β Aggregation.

Arghya Chakravorty, Samuel D McCalpin, Bikash R Sahoo, Ayyalusamy Ramamoorthy, Charles L Brooks

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry letters, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 27 citations in OpenAlex.

  1. Article
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  5. Review
  6. Review
  7. Article
  8. Ganglioside GM1 produces stable, short, and cytotoxic AβChemical communications (Cambridge, England) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Arghya ChakravortyDepartment of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States.ORCID 0000-0002-4467-1135
Samuel D McCalpinDepartment of Chemistry, Biophysics Program, Biomedical Engineering, Macromolecular Engineering and Science, and Michigan Neuroscience Institute, University of Michigan, Ann Arbor, Michigan 48109, United States.
Bikash R SahooDepartment of Chemistry, Biophysics Program, Biomedical Engineering, Macromolecular Engineering and Science, and Michigan Neuroscience Institute, University of Michigan, Ann Arbor, Michigan 48109, United States.ORCID 0000-0002-3683-1178
Ayyalusamy RamamoorthyDepartment of Chemistry, Biophysics Program, Biomedical Engineering, Macromolecular Engineering and Science, and Michigan Neuroscience Institute, University of Michigan, Ann Arbor, Michigan 48109, United States.ORCID 0000-0003-1964-1900
Charles L BrooksDepartment of Chemistry, University of Michigan, Ann Arbor, Michigan 48109, United States.ORCID 0000-0002-8149-5417
University of Michigan · US

Funding

Theory and Modeling of Biomolecules and their Interactions - Equipment SupplementR35GM130587 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI CHARLES L BROOKS · 2019 to 2026
$6.9M
Membrane interaction and disruption by the Alzheimer's amyloid-beta peptideR01AG048934 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAMAMOORTHY, AYYALUSAMY · 2016 to 2020
$2.0M
Structural Investigation of Amylin Oligomers Associated to Type-2 DiabetesR01DK132214 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAMAMOORTHY, AYYALUSAMY · 2022 to 2025
$1.4M
Computational infrastructure for biomedically-driven simulation and modelingS10OD034346 · OD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI BROOKS, CHARLES L · 2023 to 2023
$593k
NIA NIH HHS R01 AG048934NIDDK NIH HHS R01 DK132214NIGMS NIH HHS R35 GM130587NIH HHS S10 OD034346
6 · The paper itself

Abstract

A recently proposed lipid-chaperone hypothesis suggests that free lipid molecules, not bound to membranes, affect the aggregation of amyloidogenic peptides such as amyloid-β (Aβ) peptides, whose aggregates are the hallmarks of Alzheimer's disease. Here, we combine experiments with all-atom molecular dynamics simulations in explicit solvent to explore the effects of neuronal ganglioside GM1, abundant in mammalian brains, on the aggregation of two principal isoforms of Aβ, Aβ40 and Aβ42. Our simulations show that free GM1 forms stable, highly water-soluble complexes with both isoforms, and nuclear magnetic resonance experiments support the formation of well-ordered, structurally compact GM1+Aβ complexes. By simulation, we also show that Aβ40 monomers display a preference for binding to GM1-containing hetero-oligomers over GM1-lacking homo-oligomers, while Aβ42 monomers have the opposite preference. These observations explain why GM1 dose-dependently inhibits Aβ40 aggregation but has no effect on Aβ42 aggregation, as assessed by thioflavin T fluorescence.

Indexed as

Alzheimer DiseaseG(M1) GangliosideAmyloid beta-PeptidesAnimalsGangliosidesMammalsMolecular Dynamics SimulationPeptide FragmentsSolventsWaterAmyloid beta-PeptidesGangliosidesG(M1) GangliosidePeptide FragmentsSolventsWater

Identifiers

PMID36174129
PMCPMC9700483
OpenAlexW4297983225

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.