Evidence map›Paper›PMID 36173163›Full record

ArticleProtein science : a publication of the Protein Society2022

Ostrinia furnacalis PBP2 solution NMR structure: Insight into ligand binding and release mechanisms.

Salik R Dahal, Jacob L Lewellen, Shine Ayyappan, Bharat P Chaudhary, Viswanath Nukala, Smita Mohanty

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Article in Protein science : a publication of the Protein Society, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Salik R DahalDepartment of Chemistry, Oklahoma State University, Stillwater, Oklahoma, USA.
Jacob L LewellenDepartment of Chemistry, Oklahoma State University, Stillwater, Oklahoma, USA.
Shine AyyappanDepartment of Chemistry, Oklahoma State University, Stillwater, Oklahoma, USA.
Bharat P ChaudharyDepartment of Chemistry, Oklahoma State University, Stillwater, Oklahoma, USA.
Viswanath NukalaDepartment of Chemistry, Oklahoma State University, Stillwater, Oklahoma, USA.
Smita MohantyDepartment of Chemistry, Oklahoma State University, Stillwater, Oklahoma, USA.ORCID 0000-0002-1680-6338

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ostrinia furnacalis is an invasive lepidopteran agricultural pest that relies on olfaction for mating and reproduction. Male moths have an extremely sensitive olfactory system that can detect the sex pheromones emitted by females over a great distance. Pheromone-binding proteins present in the male moth antenna play a key role in the pheromone uptake, transport, and release at the dendritic membrane of the olfactory neuron. Here, we report the first high-resolution NMR structure of a pheromone-binding protein from an Ostrinia species at pH 6.5. The core of the Ostrinia furnacalis PBP2 (OfurPBP2) consists of six helices, α1a (2-14), α1b (16-22), α2 (27-37), α3 (46-60), α4 (70-80), α5 (84-100), and α6 (107-124) surrounding a large hydrophobic pocket. The structure is stabilized by three disulfide bridges, 19-54, 50-108, and 97-117. In contrast to the unstructured C-terminus of other lepidopteran PBPs, the C-terminus of OfurPBP2 folds into an α-helix (α7) at pH 6.5. The protein has nanomolar affinity towards both pheromone isomers. Molecular docking of both pheromones, E-12 and Z-12-tetradecenyl acetate, to OfurPBP2 revealed that the residues Met5, Lys6, Met8, Thr9, Phe12, Phe36, Trp37, Phe76, Ser115, Phe118, Lys119, Ile122, His123, and Ala128 interact with both isomers, while Thr9 formed a hydrogen bond with the acetate head group. NMR structure and thermal unfolding studies with CD suggest that ligand release at pH 4.5 is likely due to the partial unfolding of the protein.

Indexed as

MothsSex AttractantsAnimalsCarrier ProteinsDisulfidesFemaleInsect ProteinsLigandsMaleMolecular Docking SimulationPheromonesCarrier ProteinsDisulfidesInsect ProteinsLigandsPheromonesSex Attractantsinsect olfactionNMR structureNOEOstrinia furnacalispheromone-binding proteins (PBPs)

Identifiers

PMID36173163
PMCPMC9514217

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.