Evidence map›Paper›PMID 36172999›Full record

ArticleEMBO molecular medicine2022

A nontyphoidal Salmonella serovar domestication accompanying enhanced niche adaptation.

Yan Li, Lin Teng, Xuebin Xu, Xiaomeng Li, Xianqi Peng, Xiao Zhou, Jiaxin Du, Yanting Tang, Zhijie Jiang, Zining Wang and 7 more

Open access · goldAbstract read
In one paragraph

Article in EMBO molecular medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 3 pooled it
8.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 3 syntheses or guidelines pooled it, 62 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Article
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  6. Laboratory epidemiology ofOne health (Amsterdam, Netherlands) · 2025
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  8. Microbiological Monitoring and Microbial Susceptibility ofAntibiotics (Basel, Switzerland) · 2025
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  10. eLife · 2025
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  13. Genomic and resistome analysis ofOne health (Amsterdam, Netherlands) · 2025
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  15. Avian-specificeLife · 2025
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  16. Predicting antimicrobial resistance inComputational and structural biotechnology journal · 2024
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  19. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 4 countries.

Yan Li *Hainan Institute of Zhejiang University, Sanya, China.
Lin Teng *Institute of Preventive Veterinary Science & Department of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.ORCID 0000-0002-6871-0338
Xuebin Xu *Shanghai Municipal Center for Disease Control and Prevention, Shanghai, China.
Xiaomeng LiInstitute of Preventive Veterinary Science & Department of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.ORCID 0000-0002-4242-2469
Xianqi PengInstitute of Preventive Veterinary Science & Department of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.ORCID 0000-0001-7143-8307
Xiao ZhouInstitute of Preventive Veterinary Science & Department of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.ORCID 0000-0001-6510-4095
Jiaxin DuInstitute of Preventive Veterinary Science & Department of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.ORCID 0000-0003-3745-1131
Yanting TangInstitute of Preventive Veterinary Science & Department of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.
Zhijie JiangInstitute of Preventive Veterinary Science & Department of Veterinary Medicine, Zhejiang University College of Animal Sciences, Hangzhou, China.
Zining WangHainan Institute of Zhejiang University, Sanya, China.ORCID 0000-0001-7107-1613
Chenghao JiaHainan Institute of Zhejiang University, Sanya, China.
Anja MüllerInstitute for Veterinary Food Science, Faculty of Veterinary Medicine, Justus-Liebig University Giessen, Giessen, Germany.
Corinna KehrenbergInstitute for Veterinary Food Science, Faculty of Veterinary Medicine, Justus-Liebig University Giessen, Giessen, Germany.ORCID 0000-0001-8556-4080
Haoqiu WangHangzhou Center for Disease Control and Prevention, Hangzhou, China.
Beibei WuZhejiang Province Center for Disease Control and Prevention, Hangzhou, China.
François-Xavier WeillDepartment of Global Health, Institut Pasteur, Paris, France.ORCID 0000-0001-9941-5799
Min YueHainan Institute of Zhejiang University, Sanya, China.ORCID 0000-0002-6787-0794
ZheJiang Academy of Agricultural Sciences · CNHangzhou Center for Disease Control and Prevention · CNJustus-Liebig-Universität Gießen · DEInstitut Pasteur · FRNational Clinical Research Center for Digestive Diseases · CNShanghai Municipal Center For Disease Control Prevention · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Invasive nontyphoidal Salmonella (iNTS) causes extraintestinal infections with ~15% case fatality in many countries. However, the mechanism by which iNTS emerged in China remains unaddressed. We conducted clinical investigations of iNTS infection with recurrent treatment failure, caused by underreported Salmonella enterica serovar Livingstone (SL). Genomic epidemiology demonstrated five clades in the SL population and suggested that the international animal feed trade was a likely vehicle for their introduction into China, as evidenced by multiple independent transmission incidents. Importantly, isolates from Clade-5-I-a/b, predominant in China, showed an invasive nature in mice, chicken and zebrafish infection models. The antimicrobial susceptibility testing revealed most isolates (> 96%) in China are multidrug-resistant (MDR). Overall, we offer exploiting genomics in uncovering international transmission led by the animal feed trade and highlight an emerging hypervirulent clade with increased resistance to frontline antibiotics.

Indexed as

DomesticationSalmonella InfectionsAnimalsAnti-Bacterial AgentsDrug Resistance, Multiple, BacterialMiceSalmonellaSerogroupZebrafishAnti-Bacterial Agentsantimicrobial resistanceevolutionhost adaptationinvasive nontyphoidal SalmonellaLivingstone

Identifiers

PMID36172999
PMCPMC9641423
OpenAlexW4297964535

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.