Evidence map›Paper›PMID 36171447›Full record

ArticleScientific reports2022

Vaginal microbial shifts are unaffected by oral pre-exposure prophylaxis in South African women.

Noluthando Mazibuko-Motau, Parveen Sobia, Jiawu Xu, Joseph Ahmed Elsherbini, James E San, Lara Lewis, Andile Mtshali, Gugulethu Mzobe, Lungelo Ntuli, Salim S Abdool Karim and 5 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 4 institutions in 2 countries.

Noluthando Mazibuko-Motau *Centre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa.
Parveen Sobia *Centre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa.
Jiawu XuRagon Institute of MGH, MIT, and Harvard, Massachusetts General Hospital, Cambridge, MA, USA.
Joseph Ahmed ElsherbiniRagon Institute of MGH, MIT, and Harvard, Massachusetts General Hospital, Cambridge, MA, USA.
James E SanKwaZulu-Natal Research Innovation and Sequencing Platform, Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa.
Lara LewisCentre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa.
Andile MtshaliCentre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa.
Gugulethu MzobeCentre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa.
Lungelo NtuliCentre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa.
Salim S Abdool KarimCentre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa.
Leila E MansoorCentre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa.
Quarraisha Abdool KarimCentre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa.
Douglas S KwonRagon Institute of MGH, MIT, and Harvard, Massachusetts General Hospital, Cambridge, MA, USA.
Derseree ArcharyCentre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa.
Sinaye NgcapuCentre for the AIDS Programme of Research in South Africa, 2nd Floor, Doris Duke Medical Research Institute, 719 Umbilo Road, Durban, 4041, South Africa. sinaye.ngcapu@caprisa.org.
Centre for the AIDS Programme of Research in South Africa · ZAUniversity of KwaZulu-Natal · ZARagon Institute of MGH, MIT and Harvard · USColumbia University · US

Funding

TUBERCULOSIS SUPPLEMENTD43TW000231 · FIC · COLUMBIA UNIV NEW YORK MORNINGSIDE · PI ABDOOL KARIM, QUARRAISHA · 1993 to 2014
$13.1M
Bill & Melinda Gates Foundation INV-018075FIC NIH HHS D43 TW000231Gates Foundation BMDF,INV-018075
6 · The paper itself

Abstract

Vaginal microbiota have been shown to be a modifier of protection offered by topical tenofovir in preventing HIV infection in women, an effect not observed with oral tenofovir-based pre-exposure prophylaxis (PrEP). It remains unclear whether PrEP can influence the vaginal microbiota composition. This study investigated the impact of daily oral tenofovir disoproxil fumarate in combination with emtricitabine for PrEP on the vaginal microbiota in South African women. At baseline, Lactobacillus iners or Gardnerella vaginalis dominant vaginal communities were observed in the majority of participants. In cross sectional analysis, vaginal microbiota were not affected by the initiation and use of PrEP. Longitudinal analysis revealed that Lactobacillus crispatus-dominant "cervicotypes 1 (CT1)" communities had high probability of remaining stable in PrEP group, but had a higher probability of transitioning to L. iners-dominant CT2 communities in non-PrEP group. L. iners-dominant communities were more likely to transition to communities associated with bacterial vaginosis (BV), irrespective of PrEP or antibiotic use. As expected, BV-linked CTs had a higher probability of transitioning to L. iners than L. crispatus dominant CTs and this shift was not associated with PrEP use.

Indexed as

HIV InfectionsPre-Exposure ProphylaxisVaginosis, BacterialAnti-Bacterial AgentsCross-Sectional StudiesEmtricitabineFemaleHumansSouth AfricaTenofovirVaginaAnti-Bacterial AgentsEmtricitabineTenofovir

Identifiers

PMID36171447
PMCPMC9519742
OpenAlexW4297493665

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.