Evidence map›Paper›PMID 36171417›Full record

ArticleThe pharmacogenomics journal2022

Drug genetic associations with COVID-19 manifestations: a data mining and network biology approach.

Theodosia Charitou, Panagiota I Kontou, Ioannis A Tamposis, Georgios A Pavlopoulos, Georgia G Braliou, Pantelis G Bagos

Open access · bronzeAbstract read
In one paragraph

Article in The pharmacogenomics journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.6field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Theodosia CharitouComputer Science and Biomedical Informatics, University of Thessaly, Lamia, 35131, Greece.
Panagiota I KontouMathematics, University of Thessaly, Lamia, 35131, Greece.
Ioannis A TamposisComputer Science and Biomedical Informatics, University of Thessaly, Lamia, 35131, Greece.
Georgios A PavlopoulosInstitute for Fundamental Biomedical Research, BSRC "Alexander Fleming", Vari, Greece.
Georgia G BraliouComputer Science and Biomedical Informatics, University of Thessaly, Lamia, 35131, Greece.ORCID 0000-0003-3982-3250
Pantelis G BagosComputer Science and Biomedical Informatics, University of Thessaly, Lamia, 35131, Greece. pbagos@compgen.org.ORCID 0000-0003-4935-2325
University of Thessaly · GRNational and Kapodistrian University of Athens · GR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Available drugs have been used as an urgent attempt through clinical trials to minimize severe cases of hospitalizations with Coronavirus disease (COVID-19), however, there are limited data on common pharmacogenomics affecting concomitant medications response in patients with comorbidities. To identify the genomic determinants that influence COVID-19 susceptibility, we use a computational, statistical, and network biology approach to analyze relationships of ineffective concomitant medication with an adverse effect on patients. We statistically construct a pharmacogenetic/biomarker network with significant drug-gene interactions originating from gene-disease associations. Investigation of the predicted pharmacogenes encompassing the gene-disease-gene pharmacogenomics (PGx) network suggests that these genes could play a significant role in COVID-19 clinical manifestation due to their association with autoimmune, metabolic, neurological, cardiovascular, and degenerative disorders, some of which have been reported to be crucial comorbidities in a COVID-19 patient.

Indexed as

COVID-19 Drug TreatmentData MiningGenomicsHumansPharmacogenetics

Identifiers

PMID36171417
PMCPMC9517961
OpenAlexW4297499124

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.