Evidence map›Paper›PMID 36171190›Full record

ArticleNature communications2022

Regional gene expression signatures are associated with sex-specific functional connectivity changes in depression.

Aleksandr Talishinsky, Jonathan Downar, Petra E Vértes, Jakob Seidlitz, Katharine Dunlop, Charles J Lynch, Heather Whalley, Andrew McIntosh, Fidel Vila-Rodriguez, Zafiris J Daskalakis and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed, 3 pooled it
5.0field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 3 syntheses or guidelines pooled it, 48 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 3 countries.

Aleksandr TalishinskyDepartment of Psychiatry, Weill Cornell Medicine, New York, NY, USA.
Jonathan DownarKrembil Research Institute and Centre for Mental Health, University Health Network, Toronto, ON, USA. Jonathan.Downar@uhn.ca.
Petra E VértesDepartment of Psychiatry, University of Cambridge, Cambridge, UK.ORCID 0000-0002-0992-3210
Jakob SeidlitzDepartment of Child and Adolescent Psychiatry and Behavioral Science, Children's Hospital of Philadelphia, Philadelphia, PA, USA.ORCID 0000-0002-8164-7476
Katharine DunlopDepartment of Psychiatry, Weill Cornell Medicine, New York, NY, USA.
Charles J LynchDepartment of Psychiatry, Weill Cornell Medicine, New York, NY, USA.
Heather WhalleyCenter for Clinical Brain Sciences, University of Edinburgh, Edinburgh, UK.ORCID 0000-0002-4505-8869
Andrew McIntoshCenter for Clinical Brain Sciences, University of Edinburgh, Edinburgh, UK.ORCID 0000-0002-0198-4588
Fidel Vila-RodriguezNon-Invasive Neurostimulation Therapies Lab and Department of Psychiatry, University of British Columbia, Vancouver, BC, USA.ORCID 0000-0002-8273-8820
Zafiris J DaskalakisDepartment of Psychiatry, University of California, San Diego, California, USA.
Daniel M BlumbergerDepartment of Psychiatry, University of Toronto, Toronto, ON, USA.
Conor ListonDepartment of Psychiatry, Weill Cornell Medicine, New York, NY, USA. col2004@med.cornell.edu.ORCID 0000-0002-1639-5401
Cornell University · USUniversity of Edinburgh · GBCentre for Addiction and Mental Health · CAChildren's Hospital of Philadelphia · USUniversity Health Network · CAUniversity of California San Diego · USUniversity of Cambridge · GB

Funding

Weill Cornell/Rockefeller/Sloan-Kettering MST ProgramT32GM007739 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI HSU, KATHARINE C · 1985 to 2023
$51.1M
Efficacy of biomarker-guided rTMS for treatment resistant depressionR01MH118388 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI BHATI, MAHENDRA T, GUNNING, FAITH M · 2019 to 2025
$6.2M
Regulation of prefrontal cortical circuit function and reward-seeking behavior by stress-induced dendritic spine remodelingR01MH118451 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI Joshua Levitz, Conor M Liston · 2019 to 2026
$5.5M
Atherosclerosis in cocaine addiction: imaging risk with PET/MRR01DA049547 · NIDA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI Nelly Alia-Klein, Zahi A. Fayad · 2022 to 2026
$3.9M
Prefrontal Cortical Microcircuit Mechanisms of Working Memory Deficits in Chronic StressR01MH109685 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI LISTON, CONOR M · 2016 to 2020
$2.8M
Diagnostic and prognostic biomarkers for subtypes of addiction-related circuit dysfunctionR01DA047851 · NIDA · WEILL MEDICAL COLL OF CORNELL UNIV · PI GOLDSTEIN, RITA Z, LISTON, CONOR M · 2019 to 2022
$2.4M
Sex-Specific Functional Connectivity Changes in Major Depressive DisorderF30MH124317 · NIMH · WEILL MEDICAL COLL OF CORNELL UNIV · PI TALISHINSKY, ALEKSANDR · 2021 to 2022
$98k
NIDA NIH HHS R01 DA047851NIDA NIH HHS R01 DA049547NIGMS NIH HHS T32 GM007739NIMH NIH HHS F30 MH124317NIMH NIH HHS R01 MH109685NIMH NIH HHS R01 MH118388NIMH NIH HHS R01 MH118451
6 · The paper itself

Abstract

The neural substrates of depression may differ in men and women, but the underlying mechanisms are incompletely understood. Here, we show that depression is associated with sex-specific patterns of abnormal functional connectivity in the default mode network and in five regions of interest with sexually dimorphic transcriptional effects. Regional differences in gene expression in two independent datasets explained the neuroanatomical distribution of abnormal connectivity. These gene sets varied by sex and were strongly enriched for genes implicated in depression, synapse function, immune signaling, and neurodevelopment. In an independent sample, we confirmed the prediction that individual differences in default mode network connectivity are explained by inferred brain expression levels for six depression-related genes, including PCDH8, a brain-specific protocadherin integral membrane protein implicated in activity-related synaptic reorganization. Together, our results delineate both shared and sex-specific changes in the organization of depression-related functional networks, with implications for biomarker development and fMRI-guided therapeutic neuromodulation.

Indexed as

Brain MappingTranscriptomeBrainDepressionFemaleHumansMagnetic Resonance ImagingMaleNeural PathwaysProtocadherinsProtocadherins

Identifiers

PMID36171190
PMCPMC9519925
OpenAlexW4297474845

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.