Evidence map›Paper›PMID 36170822›Full record

ArticleCell reports2022

Topoisomerase 1-dependent R-loop deficiency drives accelerated replication and genomic instability.

Dan Sarni, Sonia Barroso, Alon Shtrikman, Michal Irony-Tur Sinai, Yifat S Oren, Andrés Aguilera, Batsheva Kerem

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 18 citations in OpenAlex.

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  10. Transcription-Replication Conflicts: Unlocking New Frontiers in Cancer.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Dan SarniDepartment of Genetics, The Life Sciences Institute, The Hebrew University, Jerusalem 91904, Israel.
Sonia BarrosoDepartment of Genome Biology, Andalusian Center of Molecular Biology and Regenerative Medicine CABIMER, Seville Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.
Alon ShtrikmanDepartment of Genetics, The Life Sciences Institute, The Hebrew University, Jerusalem 91904, Israel.
Michal Irony-Tur SinaiDepartment of Genetics, The Life Sciences Institute, The Hebrew University, Jerusalem 91904, Israel.
Yifat S OrenDepartment of Genetics, The Life Sciences Institute, The Hebrew University, Jerusalem 91904, Israel.
Andrés AguileraDepartment of Genome Biology, Andalusian Center of Molecular Biology and Regenerative Medicine CABIMER, Seville Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.
Batsheva KeremDepartment of Genetics, The Life Sciences Institute, The Hebrew University, Jerusalem 91904, Israel. Electronic address: batshevak@savion.huji.ac.il.
Hebrew University of Jerusalem · ILCentro Andaluz de Biología Molecular y Medicina Regenerativa · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

DNA replication is a complex process tightly regulated to ensure faithful genome duplication, and its perturbation leads to DNA damage and genomic instability. Replication stress is commonly associated with slow and stalled replication forks. Recently, accelerated replication has emerged as a non-canonical form of replication stress. However, the molecular basis underlying fork acceleration is largely unknown. Here, we show that mutated HRAS activation leads to increased topoisomerase 1 (TOP1) expression, causing aberrant replication fork acceleration and DNA damage by decreasing RNA-DNA hybrids or R-loops. In these cells, restoration of TOP1 expression or mild replication inhibition rescues the perturbed replication and reduces DNA damage. Furthermore, TOP1 or RNaseH1 overexpression induces accelerated replication and DNA damage, highlighting the importance of TOP1 equilibrium in regulating R-loop homeostasis to ensure faithful DNA replication and genome integrity. Altogether, our results dissect a mechanism of oncogene-induced DNA damage by aberrant replication fork acceleration.

Indexed as

Genomic InstabilityR-Loop StructuresDNADNA DamageDNA ReplicationHumansRNADNARNACP: Molecular biologyDNA replicationgenomic instabilityoncogenesreplication stressR loopstopoisomerase 1

Identifiers

PMID36170822
PMCPMC9532845
OpenAlexW4297373140

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.