Evidence map›Paper›PMID 36170352›Full record

SynthesisCirculation. Genomic and precision medicine2022

Pathway-Specific Polygenic Risk Scores Identify Obstructive Sleep Apnea-Related Pathways Differentially Moderating Genetic Susceptibility to Coronary Artery Disease.

Matthew O Goodman, Brian E Cade, Neomi A Shah, Tianyi Huang, Hassan S Dashti, Richa Saxena, Martin K Rutter, Peter Libby, Tamar Sofer, Susan Redline

Open access · hybridAbstract readMeta-Analysis
In one paragraph

Synthesis in Circulation. Genomic and precision medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
3.5field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 31 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. TGF-β Pathway-Based Polygenic Risk Score Modifies the Association between Red Meat Intake and Colorectal Cancer Risk: Application of a Novel Pathway-Based PRS Method.Cancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2026
    Article
  5. A polygenic risk score modifies the cardiovascular risk associated with obstructive sleep apnea.Sleep advances : a journal of the Sleep Research Society · 2026
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Review
  11. Article
  12. The Role of Sleep in Cardiovascular Disease.Current atherosclerosis reports · 2024
    Review
  13. Article
  14. Many roads to a gene-environment interaction.American journal of human genetics · 2024
    Review
  15. Review
  16. Article
  17. Sleep and cardiovascular disease.Emerging topics in life sciences · 2023
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 3 countries.

Matthew O GoodmanDivision of Sleep & Circadian Disorders (M.O.G., B.E.C., R.S., T.S., S.R.), Brigham and Women's Hospital & Harvard Medical School.ORCID 0000-0002-3982-7940
Brian E CadeDivision of Sleep & Circadian Disorders (M.O.G., B.E.C., R.S., T.S., S.R.), Brigham and Women's Hospital & Harvard Medical School.ORCID 0000-0003-1424-0673
Neomi A ShahIcahn School of Medicine at Mount Sinai, New York, NY (N.A.S.).
Tianyi HuangChanning Division of Network Medicine (T.H.), Brigham and Women's Hospital & Harvard Medical School.ORCID 0000-0001-8420-9167
Hassan S DashtiProgram in Medical & Population Genetics, Broad Institute, Cambridge, MA (M.O.G., B.E.C., H.S.D., R.S.).ORCID 0000-0002-1650-679X
Richa SaxenaDivision of Sleep & Circadian Disorders (M.O.G., B.E.C., R.S., T.S., S.R.), Brigham and Women's Hospital & Harvard Medical School.
Martin K RutterDivision of Diabetes, Endocrinology & Gastroenterology, School of Medical Sciences, Faculty of Biology, Medicine and Health, University of Manchester (M.K.R.).ORCID 0000-0001-6380-539X
Peter LibbyDivision of Cardiovascular Medicine, Department of Medicine (P.L.), Brigham and Women's Hospital & Harvard Medical School.ORCID 0000-0002-1502-502X
Tamar SoferDivision of Sleep & Circadian Disorders (M.O.G., B.E.C., R.S., T.S., S.R.), Brigham and Women's Hospital & Harvard Medical School.ORCID 0000-0001-8520-8860
Susan RedlineDivision of Sleep & Circadian Disorders (M.O.G., B.E.C., R.S., T.S., S.R.), Brigham and Women's Hospital & Harvard Medical School.ORCID 0000-0002-6585-1610
Brigham and Women's Hospital · USBroad Institute · USIcahn School of Medicine at Mount Sinai · USManchester Academic Health Science Centre · GB

Funding

Phenotypic and Molecular Signatures for Sleep Apnea and Related MorbiditiesR35HL135818 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI REDLINE, SUSAN S. · 2017 to 2023
$7.2M
Genetic Epidemiology of Sleep Apnea and Comorbidities in BiobanksR01HL153805 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI CADE, BRIAN EDMAND · 2021 to 2025
$3.7M
Leveraging Correlated Traits to Identify Genetic Associations with Sleep Disordered BreathingR21HL145425 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI SOFER, TAMAR · 2019 to 2020
$269k
Identifying Contributions of Pulmonary Inflammation to Sleep-Disordered BreathingR03HL154284 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI CADE, BRIAN EDMAND · 2020 to 2021
$179k
Investigating pathway-specific genetic risk of coronary artery disease and its relationship with intermittent hypoxia in obstructive sleep apneaF32HL152555 · NHLBI · BRIGHAM AND WOMEN'S HOSPITAL · PI GOODMAN, MATTHEW · 2021 to 2021
$33k
Medical Research Council MC_PC_17228Medical Research Council MC_QA137853NHLBI NIH HHS F32 HL152555NHLBI NIH HHS R01 HL153805NHLBI NIH HHS R03 HL154284NHLBI NIH HHS R21 HL145425NHLBI NIH HHS R35 HL135818
6 · The paper itself

Abstract

backgroundObstructive sleep apnea (OSA) and its features, such as chronic intermittent hypoxia, may differentially affect specific molecular pathways and processes in the pathogenesis of coronary artery disease (CAD) and influence the subsequent risk and severity of CAD events. In particular, competing adverse (eg, inflammatory) and protective (eg, increased coronary collateral blood flow) mechanisms may operate, but remain poorly understood. We hypothesize that common genetic variation in selected molecular pathways influences the likelihood of CAD events differently in individuals with and without OSA, in a pathway-dependent manner.

methodsWe selected a cross-sectional sample of 471 877 participants from the UK Biobank, with 4974 ascertained to have OSA, 25 988 to have CAD, and 711 to have both. We calculated pathway-specific polygenic risk scores for CAD, based on 6.6 million common variants evaluated in the CARDIoGRAMplusC4D genome-wide association study (Coronary ARtery DIsease Genome wide Replication and Meta-analysis [CARDIoGRAM] plus The Coronary Artery Disease [C4D] Genetics), annotated to specific genes and pathways using functional genomics databases. Based on prior evidence of involvement with intermittent hypoxia and CAD, we tested pathway-specific polygenic risk scores for the HIF1 (hypoxia-inducible factor 1), VEGF (vascular endothelial growth factor), NFκB (nuclear factor kappa-light-chain-enhancer of activated B cells) and TNF (tumor necrosis factor) signaling pathways.

resultsIn a multivariable-adjusted logistic generalized additive model, elevated pathway-specific polygenic risk scores for the Kyoto Encyclopedia of Genes and Genomes VEGF pathway (39 genes) associated with protection for CAD in OSA (interaction odds ratio 0.86,

conclusionsWe find evidence that pathway-specific genetic risk of CAD differs between individuals with and without OSA in a qualitatively pathway-dependent manner. These results provide evidence that gene-by-environment interaction influences CAD risk in certain pathways among people with OSA, an effect that is not well-captured by the genome-wide PRS. This invites further study of how OSA interacts with genetic risk at the molecular level and suggests eventual personalization of OSA treatment to reduce CAD risk according to individual pathway-specific genetic risk profiles.

Indexed as

Coronary Artery DiseaseSleep Apnea, ObstructiveCross-Sectional StudiesGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansHypoxiaHypoxia-Inducible Factor 1Risk FactorsTumor Necrosis FactorsVascular Endothelial Growth Factor AHypoxia-Inducible Factor 1Tumor Necrosis FactorsVascular Endothelial Growth Factor Acoronary artery diseasegene-environment interactiongenetic profilehumanshypoxiasleep apnea, obstructivevascular endothelial growth factor A

Identifiers

PMID36170352
PMCPMC9588629
OpenAlexW4297457882

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.