Evidence map›Paper›PMID 36169488›Full record

ArticleRevista da Sociedade Brasileira de Medicina Tropical2022

Characterization of insect-specific Culex flavivirus (Flaviviridae) nucleotide sequences in mosquitoes from urban parks in São Paulo, Brazil.

Thaís de Moura Coletti, Camila Malta Romano, Paulo Roberto Urbinatti, Renildo Souza Teixeira, Leila Weiss de Almeida Pedrosa, Marcello Schiavo Nardi, Delsio Natal, Antônio Charlys da Costa, Jaqueline Goes de Jesus, Ingra Morales Claro and 4 more

Abstract read
In one paragraph

Article in Revista da Sociedade Brasileira de Medicina Tropical, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Thaís de Moura ColettiUniversidade de São Paulo, Faculdade de Medicina, Instituto de Medicina Tropical, Laboratório de Investigação Médica-49, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0003-1693-7984
Camila Malta RomanoUniversidade de São Paulo, Faculdade de Medicina, Hospital das Clínicas, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0003-4550-1987
Paulo Roberto UrbinattiUniversidade de São Paulo, Faculdade de Saúde Pública, Departamento de Epidemiologia, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0001-5757-9576
Renildo Souza TeixeiraPrefeitura de São Paulo, Centro de Controle de Zoonoses, Laboratório de Fauna Sinantrópica, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0002-8576-8996
Leila Weiss de Almeida PedrosaSecretaria do Verde e Meio Ambiente, Divisão da Fauna Silvestre, Coordenadoria de Gestão de Parques e Biodiversidade, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0001-7665-229X
Marcello Schiavo NardiSecretaria do Verde e Meio Ambiente, Divisão da Fauna Silvestre, Coordenadoria de Gestão de Parques e Biodiversidade, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0001-6234-3365
Delsio NatalUniversidade de São Paulo, Faculdade de Saúde Pública, Departamento de Epidemiologia, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0002-8717-8578
Antônio Charlys da CostaUniversidade de São Paulo, Faculdade de Medicina, Instituto de Medicina Tropical, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0001-5516-5177
Jaqueline Goes de JesusUniversidade de São Paulo, Faculdade de Medicina, Instituto de Medicina Tropical, Laboratório de Investigação Médica-46, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0002-5404-272X
Ingra Morales ClaroUniversidade de São Paulo, Faculdade de Medicina, Instituto de Medicina Tropical, Laboratório de Investigação Médica-46, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0001-8637-2910
Ester Cerdeira SabinoUniversidade de São Paulo, Faculdade de Medicina, Instituto de Medicina Tropical, Laboratório de Investigação Médica-46, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0003-2623-5126
Steven S WitkinUniversidade de São Paulo, Faculdade de Medicina, Instituto de Medicina Tropical, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0002-3502-3929
Mauro Toledo MarrelliUniversidade de São Paulo, Faculdade de Saúde Pública, Departamento de Epidemiologia, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0002-0312-8777
Licia Natal FernandesUniversidade de São Paulo, Faculdade de Medicina, Instituto de Medicina Tropical, Laboratório de Investigação Médica-49, São Paulo, SP, Brasil.ORCID http://orcid.org/0000-0001-8008-1338

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundDespite their worldwide occurrence, the distribution and role of insect-specific flaviviruses (ISFs) remain unclear.

methodsWe evaluated the presence of ISFs in mosquitoes collected in São Paulo, Brazil, using reverse transcription and semi-nested polymerase chain reaction (PCR). Some of the positive samples were subjected to nanopore sequencing.

resultsTwelve mosquito pools (2.8%) tested positive for flavivirus infection. Nanopore sequencing was successfully performed on six samples. Phylogenetic analysis grouped these sequences into genotype 2 of Culex flavivirus (CxFV).

conclusionsThe identification of CxFV genotype 2 at new locations in São Paulo highlights the importance of understanding the role of ISFs in mosquito vector competence.

Indexed as

CulexCulicidaeFlaviviridaeFlavivirusAnimalsBase SequenceBrazilParks, RecreationalPhylogeny

Identifiers

PMID36169488
PMCPMC9549946

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.