Evidence map›Paper›PMID 36168546›Full record

ArticleOpen forum infectious diseases2022

Natural Language Processing and Machine Learning to Identify People Who Inject Drugs in Electronic Health Records.

David Goodman-Meza, Amber Tang, Babak Aryanfar, Sergio Vazquez, Adam J Gordon, Michihiko Goto, Matthew Bidwell Goetz, Steven Shoptaw, Alex A T Bui

Abstract read
In one paragraph

Article in Open forum infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

David Goodman-MezaDivision of Infectious Diseases, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California, USA.ORCID https://orcid.org/0000-0001-9382-3564
Amber TangDepartment of Internal Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California, USA.
Babak AryanfarVeterans Affairs Greater Los Angeles Healthcare System, Los Angeles, California, USA.
Sergio VazquezUndergraduate Studies, Dartmouth College, Hanover, New Hampshire, USA.
Adam J GordonInformatics, Decision-Enhancement, and Analytic Sciences Center, Veterans Affairs Salt Lake City Health Care System, Salt Lake City, Utah, USA.
Michihiko GotoDepartment of Internal Medicine, University of Iowa, Iowa City, Iowa, USA.ORCID https://orcid.org/0000-0001-6612-5613
Matthew Bidwell GoetzVeterans Affairs Greater Los Angeles Healthcare System, Los Angeles, California, USA.
Steven ShoptawDepartment of Family Medicine, David Geffen School of Medicine, University of California, Los Angeles, Los Angeles, California, USA.
Alex A T BuiMedical and Imaging Informatics Group, Department of Radiological Sciences, University of California, Los Angeles, Los Angeles, California, USA.

Funding

UCLA Clinical Translational Science InstituteUL1TR001881 · NCATS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ARLEEN F. BROWN, ARASH NAEIM · 2016 to 2026
$118.1M
UCLA Rapid, Relevant, Rigorous Implementation Science HubP30MH058107 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI Sung-Jae Lee · 1997 to 2026
$53.5M
Using data science to measure the impact of opioid agonist therapy in patients admitted with Staphylococcus aureus bloodstream infectionsK08DA048163 · NIDA · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI GOODMAN, DAVID · 2019 to 2023
$1.0M
NCATS NIH HHS UL1 TR001881NIDA NIH HHS K08 DA048163NIMH NIH HHS P30 MH058107
6 · The paper itself

Abstract

Background: Improving the identification of people who inject drugs (PWID) in electronic medical records can improve clinical decision making, risk assessment and mitigation, and health service research. Identification of PWID currently consists of heterogeneous, nonspecific Methods: We manually reviewed 1000 records of patients diagnosed with Results: Random forest with and without NegEx were the best-performing NLP/ML algorithms in the training set. Random forest with NegEx outperformed all Conclusions: NLP/ML outperformed

Indexed as

EHRmachine learningNLPPWID

Identifiers

PMID36168546
PMCPMC9511274

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.