Evidence map›Paper›PMID 36166477›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Associations between forensic loci and expression levels of neighboring genes may compromise medical privacy.

Mayra M Bañuelos, Yuómi Jhony A Zavaleta, Alennie Roldan, Rochelle-Jan Reyes, Miguel Guardado, Berenice Chavez Rojas, Thet Nyein, Ana Rodriguez Vega, Maribel Santos, Emilia Huerta-Sanchez and 1 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. STR profiling in a cohort of Saudi patients with acute leukemia.Journal of Taibah University Medical Sciences · 2025
    Article
  5. Principles and Policy Recommendations for Comprehensive Genetic Data Governance.Proceedings of the AAAI/ACM Conference on AI, Ethics, and Society · 2025
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Mayra M BañuelosDepartment of Mathematics, San Francisco State University, San Francisco, CA 94132.ORCID 0000-0002-6292-6269
Yuómi Jhony A ZavaletaDepartment of Biology, San Francisco State University, San Francisco, CA 94132.
Alennie RoldanDepartment of Biology, San Francisco State University, San Francisco, CA 94132.
Rochelle-Jan ReyesDepartment of Biology, San Francisco State University, San Francisco, CA 94132.
Miguel GuardadoDepartment of Mathematics, San Francisco State University, San Francisco, CA 94132.
Berenice Chavez RojasDepartment of Biology, San Francisco State University, San Francisco, CA 94132.ORCID 0000-0001-6831-1479
Thet NyeinDepartment of Mathematics, San Francisco State University, San Francisco, CA 94132.
Ana Rodriguez VegaDepartment of Biology, San Francisco State University, San Francisco, CA 94132.ORCID 0000-0001-7545-9500
Maribel SantosDepartment of Biology, San Francisco State University, San Francisco, CA 94132.
Emilia Huerta-SanchezEcology, Evolution and Organismal Biology, Brown University, Providence, RI 02912.ORCID 0000-0002-1506-5494
Rori V RohlfsDepartment of Biology, San Francisco State University, San Francisco, CA 94132.ORCID 0000-0002-2625-192X

Funding

SFSU MBRS - RISER25GM059298 · NIGMS · SAN FRANCISCO STATE UNIVERSITY · PI BAIRD, TEASTER T, BAYLISS, FRANK T · 1999 to 2021
$21.0M
UPGRADE OF COMMUNICATIONS INFRASTRUCTURET34GM008574 · NIGMS · SAN FRANCISCO STATE UNIVERSITY · PI BAYLISS, FRANK T, ESQUERRA, RAYMOND M. · 1996 to 2021
$14.5M
SFSU MA-MS/PHD BRIDGE TO THE FUTURER25GM048972 · NIGMS · SAN FRANCISCO STATE UNIVERSITY · PI BAYLISS, FRANK T, FUSE, MEGUMI M. · 1992 to 2020
$5.6M
Characterizing modes of natural selection via diverse ancient and modern samplesR35GM128946 · NIGMS · BROWN UNIVERSITY · PI Emilia Huerta-Sanchez · 2018 to 2026
$3.1M
Predoctoral Training Program in Biological Data Science at Brown UniversityT32GM128596 · NIGMS · BROWN UNIVERSITY · PI RAMACHANDRAN, SOHINI, SANDSTEDE, BJORN · 2018 to 2022
$1.5M
HEART & SOUL: Enabling full representation in biomedical Big Data scienceR25MD011714 · NIMHD · SAN FRANCISCO STATE UNIVERSITY · PI AKOM, ANTWI AARON · 2017 to 2019
$950k
NIGMS NIH HHS R25 GM048972NIGMS NIH HHS R25 GM059298NIGMS NIH HHS R35 GM128946NIGMS NIH HHS T32 GM128596NIGMS NIH HHS T34 GM008574NIMHD NIH HHS R25 MD011714
6 · The paper itself

Abstract

A set of 20 short tandem repeats (STRs) is used by the US criminal justice system to identify suspects and to maintain a database of genetic profiles for individuals who have been previously convicted or arrested. Some of these STRs were identified in the 1990s, with a preference for markers in putative gene deserts to avoid forensic profiles revealing protected medical information. We revisit that assumption, investigating whether forensic genetic profiles reveal information about gene-expression variation or potential medical information. We find six significant correlations (false discovery rate = 0.23) between the forensic STRs and the expression levels of neighboring genes in lymphoblastoid cell lines. We explore possible mechanisms for these associations, showing evidence compatible with forensic STRs causing expression variation or being in linkage disequilibrium with a causal locus in three cases and weaker or potentially spurious associations in the other three cases. Together, these results suggest that forensic genetic loci may reveal expression levels and, perhaps, medical information.

Indexed as

Forensic GeneticsGenetic LociMicrosatellite RepeatsPrivacyGene FrequencyGenetics, PopulationHumansLinkage DisequilibriumCODIS locidata privacyforensic geneticsgene expressionSTRs

Identifiers

PMID36166477
PMCPMC9546536

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.