Evidence map›Paper›PMID 36164819›Full record

ArticleThe Plant journal : for cell and molecular biology2022

Liguleless narrow and narrow odd dwarf act in overlapping pathways to regulate maize development and metabolism.

María Jazmín Abraham-Juárez, Michael Busche, Alyssa A Anderson, China Lunde, Jeremy Winders, Shawn A Christensen, Charles T Hunter, Sarah Hake, Jacob O Brunkard

Open access · bronzeAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Genetic diversity, GWAS, and candidate genes identification for plant architecture traits in maize (Zea mays L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026
    Article
  2. Review
  3. Review
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 2 countries.

María Jazmín Abraham-JuárezLaboratorio Nacional de Genómica para la Biodiversidad, Unidad de Genómica Avanzada, Centro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional, Guanajuato, 36821, Mexico.ORCID 0000-0002-5468-8176
Michael BuscheLaboratory of Genetics, University of Wisconsin, Madison, Wisconsin, 53706, USA.ORCID 0000-0001-8845-3300
Alyssa A AndersonDepartment of Plant and Microbial Biology, University of California, Berkeley, California, 94720, USA.
China LundeDepartment of Plant and Microbial Biology, University of California, Berkeley, California, 94720, USA.ORCID 0000-0003-0513-9709
Jeremy WindersGenomics and Bioinformatics Research Unit, US Department of Agriculture-Agricultural Research Service, Raleigh, North Carolina, USA.ORCID 0000-0003-4596-5466
Shawn A ChristensenNutrition, Dietetics, and Food Science, Brigham Young University, Provo, Utah, 84602, USA.
Charles T HunterChemistry Research Unit, USDA Agricultural Research Service, Gainesville, Florida, 32608, USA.ORCID 0000-0002-2652-9485
Sarah HakeDepartment of Plant and Microbial Biology, University of California, Berkeley, California, 94720, USA.ORCID 0000-0001-6953-1529
Jacob O BrunkardLaboratory of Genetics, University of Wisconsin, Madison, Wisconsin, 53706, USA.ORCID 0000-0001-6407-9393
Agricultural Research Service · USBrigham Young University · USCentro de Investigación y de Estudios Avanzados del Instituto Politécnico Nacional · MXUniversity of California, Berkeley · USUniversity of Wisconsin–Madison · US

Funding

A tRNA synthetase is an amino acid sensor for TOR in plantsR01GM145814 · NIGMS · UNIVERSITY OF WISCONSIN-MADISON · PI Jacob O Brunkard · 2022 to 2026
$1.8M
An aminoacyl tRNA synthetase is a nitrogen sensor that activates TOR in plantsDP5OD023072 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI BRUNKARD, JACOB O · 2016 to 2020
$1.6M
NIGMS NIH HHS R01 GM145814NIH HHS DP5 OD023072
6 · The paper itself

Abstract

Narrow odd dwarf (nod) and Liguleless narrow (Lgn) are pleiotropic maize mutants that both encode plasma membrane proteins, cause similar developmental patterning defects, and constitutively induce stress signaling pathways. To investigate how these mutants coordinate maize development and physiology, we screened for protein interactors of NOD by affinity purification. LGN was identified by this screen as a strong candidate interactor, and we confirmed the NOD-LGN molecular interaction through orthogonal experiments. We further demonstrated that LGN, a receptor-like kinase, can phosphorylate NOD in vitro, hinting that they could act in intersecting signal transduction pathways. To test this hypothesis, we generated Lgn-R;nod mutants in two backgrounds (B73 and A619), and found that these mutations enhance each other, causing more severe developmental defects than either single mutation on its own, with phenotypes including very narrow leaves, increased tillering, and failure of the main shoot. Transcriptomic and metabolomic analyses of the single and double mutants in the two genetic backgrounds revealed widespread induction of pathogen defense genes and a shift in resource allocation away from primary metabolism in favor of specialized metabolism. These effects were similar in each single mutant and heightened in the double mutant, leading us to conclude that NOD and LGN act cumulatively in overlapping signaling pathways to coordinate growth-defense tradeoffs in maize.

Indexed as

Plant ProteinsZea maysGene Expression Regulation, PlantMutationPhenotypePlant LeavesPlant ProteinsCo-immunoprecipitationFunctional genomicsGenetic modifiersGrowth-defense tradeoffsMaize geneticsMetabolomicsPhytoalexinsPlant developmentPlant signal transductionReceptor-like kinase

Identifiers

PMID36164819
PMCPMC9827925
OpenAlexW4297258444

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.