Evidence map›Paper›PMID 36162816›Full record

ArticleDevelopment (Cambridge, England)2022

Retrovirus-derived RTL5 and RTL6 genes are novel constituents of the innate immune system in the eutherian brain.

Masahito Irie, Johbu Itoh, Ayumi Matsuzawa, Masahito Ikawa, Hiroshi Kiyonari, Miho Kihara, Toru Suzuki, Yuichi Hiraoka, Fumitoshi Ishino, Tomoko Kaneko-Ishino

Open access · hybridAbstract read
In one paragraph

Article in Development (Cambridge, England), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 25 citations in OpenAlex.

  1. Review
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  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. International journal of molecular sciences · 2024
    Article
  9. Article
  10. Article
  11. Article
  12. Retrovirus-DerivedInternational journal of molecular sciences · 2023
    Article
  13. Review
  14. Article
  15. Roles of retrovirus-derivedFrontiers in cell and developmental biology · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Masahito IrieFaculty of Nursing, School of Medicine, Tokai University, Kanagawa 259-1193, Japan.
Johbu ItohDepartment of Pathology, School of Medicine, Tokai University, Kanagawa 259-1193, Japan.
Ayumi MatsuzawaDepartment of Epigenetics, Medical Research Institute (MRI), Tokyo Medical and Dental University (TMDU), Tokyo 113-8510, Japan.
Masahito IkawaAnimal Resource Center for Infectious Diseases, Research Institute for Microbial Diseases, Osaka 565-0871, Japan.ORCID 0000-0001-9859-6217
Hiroshi KiyonariLaboratory for Animal Resources and Genetic Engineering, RIKEN Center for Biosystems Dynamics Research, Kobe 650-0047, Japan.ORCID 0000-0002-1509-8747
Miho KiharaLaboratory for Animal Resources and Genetic Engineering, RIKEN Center for Biosystems Dynamics Research, Kobe 650-0047, Japan.
Toru SuzukiLaboratory of Genome Editing for Biomedical Research, MRI, TMDU, Tokyo 113-8510, Japan.ORCID 0000-0002-0174-0794
Yuichi HiraokaLaboratory of Genome Editing for Biomedical Research, MRI, TMDU, Tokyo 113-8510, Japan.ORCID 0000-0002-4492-4403
Fumitoshi IshinoDepartment of Epigenetics, Medical Research Institute (MRI), Tokyo Medical and Dental University (TMDU), Tokyo 113-8510, Japan.ORCID 0000-0001-8458-6069
Tomoko Kaneko-IshinoFaculty of Nursing, School of Medicine, Tokai University, Kanagawa 259-1193, Japan.ORCID 0000-0002-2566-9961
Tokyo Medical and Dental University · JPRIKEN Center for Biosystems Dynamics Research · JPTokai University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Retrotransposon Gag-like 5 [RTL5, also known as sushi-ichi-related retrotransposon homolog 8 (SIRH8)] and RTL6 (also known as SIRH3) are eutherian-specific genes presumably derived from a retrovirus and phylogenetically related to each other. They, respectively, encode a strongly acidic and extremely basic protein, and are well conserved among the eutherians. Here, we report that RTL5 and RTL6 are microglial genes with roles in the front line of innate brain immune response. Venus and mCherry knock-in mice exhibited expression of RTL5-mCherry and RTL6-Venus fusion proteins in microglia and appeared as extracellular dots and granules in the central nervous system. These proteins display a rapid response to pathogens such as lipopolysaccharide (LPS), double-stranded (ds) RNA analog and non-methylated CpG DNA, acting both cooperatively and/or independently. Experiments using Rtl6 or Rtl5 knockout mice provided additional evidence that RTL6 and RTL5 act as factors against LPS and dsRNA, respectively, in the brain, providing the first demonstration that retrovirus-derived genes play a role in the eutherian innate immune system. Finally, we propose a model emphasizing the importance of extra-embryonic tissues as the origin site of retrovirus-derived genes. This article has an associated 'The people behind the papers' interview.

Indexed as

LipopolysaccharidesRetroviridaeAnimalsBrainEutheriaHumansImmune SystemImmunity, InnateMiceMice, KnockoutMicrogliaRetroelementsRNA, Double-StrandedLipopolysaccharidesRetroelementsRNA, Double-StrandedBrainEutherian-specific geneInnate immunityMicrogliaPathogen reactionRetrovirus-derived acquired genes

Identifiers

PMID36162816
PMCPMC9641642
OpenAlexW4297249876

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.