Evidence map›Paper›PMID 36161931›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

Degradation of gene silencer is essential for expression of foreign genes and bacterial colonization of the mammalian gut.

Jeongjoon Choi, Matias Schmukler, Eduardo A Groisman

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. H-NS controls the susceptibility ofFrontiers in veterinary science · 2025
    Article
  8. Article
  9. Article
  10. Article
  11. Advancing evolution: Bacteria break down gene silencer to express horizontally acquired genes.BioEssays : news and reviews in molecular, cellular and developmental biology · 2023
    Article
  12. Article
  13. How Bacterial Pathogens Coordinate Appetite with Virulence.Microbiology and molecular biology reviews : MMBR · 2023
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Jeongjoon ChoiDepartment of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT 06536.
Matias SchmuklerDepartment of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT 06536.
Eduardo A GroismanDepartment of Microbial Pathogenesis, Yale School of Medicine, New Haven, CT 06536.ORCID 0000-0001-6860-7691
Yale University · US

Funding

REGULATION OF SALMONELLA VIRULENCE BY THE PHOP PROTEINR01AI049561 · NIAID · YALE UNIVERSITY · PI Eduardo Groisman · 2001 to 2026
$9.7M
HHS | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI49561NIAID NIH HHS R01 AI049561
6 · The paper itself

Abstract

Horizontal gene transfer drives bacterial evolution. To confer new properties, horizontally acquired genes must overcome gene silencing by nucleoid-associated proteins, such as the heat-stable nucleoid structuring (H-NS) protein. Enteric bacteria possess proteins that displace H-NS from foreign genes, form nonfunctional oligomers with H-NS, and degrade H-NS, raising the question of whether any of these mechanisms play a role in overcoming foreign gene silencing in vivo. To answer this question, we mutagenized the

Indexed as

Escherichia coli ProteinsProtease LaAnimalsBacterial ProteinsDNA-Binding ProteinsEscherichia coliGene Expression Regulation, BacterialGene SilencingMammalsMiceBacterial ProteinsDNA-Binding ProteinsEscherichia coli ProteinsProtease LaantisilencingEscherichia coliH-NSLonprotease

Identifiers

PMID36161931
PMCPMC9546599
OpenAlexW4297092779

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.