Evidence map›Paper›PMID 36161696›Full record

ArticleAmerican journal of medical genetics. Part A2022

TBX6 as a cause of a combined skeletal-kidney dysplasia syndrome.

Guozhuang Li, Alanna Strong, Haojun Wang, Ji-Sun Kim, Deborah Watson, Sen Zhao, Courtney Vaccaro, Erum Hartung, Hakon Hakonarson, Terry Jianguo Zhang and 2 more

Open access · greenAbstract read
In one paragraph

Article in American journal of medical genetics. Part A, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 13 citations in OpenAlex.

  1. Coexistence of a NovelJournal of clinical medicine · 2026
    Article
  2. [Prenatal ultrasound and genetic characteristics of 60 fetuses with 16p11.2 microdeletion].Zhong nan da xue xue bao. Yi xue ban = Journal of Central South University. Medical sciences · 2026
    Article
  3. Article
  4. Article
  5. The role of genetics and molecular mechanisms in early onset scoliosis.Journal of clinical orthopaedics and trauma · 2026
    Review
  6. Article
  7. The pleiotropic spectrum of proximal 16p11.2 CNVs.American journal of human genetics · 2024
    Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Guozhuang LiDepartment of Orthopedic Surgery, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Alanna StrongDivision of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.ORCID 0000-0001-9261-244X
Haojun WangDepartment of Urology, Beijing Chaoyang Hospital, Capital Medical University, Beijing, China.
Ji-Sun KimDepartment of Pediatrics, Rutgers Robert Wood Johnson Medical Center, New Brunswick, New Jersey, USA.
Deborah WatsonThe Center for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Sen ZhaoDepartment of Orthopedic Surgery, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Courtney VaccaroThe Center for Applied Genomics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Erum HartungDivision of Nephrology, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.
Hakon HakonarsonDivision of Human Genetics, Children's Hospital of Philadelphia, Philadelphia, Pennsylvania, USA.ORCID 0000-0003-2814-7461
Terry Jianguo ZhangDepartment of Orthopedic Surgery, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Philip F GiampietroDepartment of Pediatrics, Rutgers Robert Wood Johnson Medical Center, New Brunswick, New Jersey, USA.
Nan WuDepartment of Orthopedic Surgery, State Key Laboratory of Complex Severe and Rare Diseases, Peking Union Medical College Hospital, Peking Union Medical College and Chinese Academy of Medical Sciences, Beijing, China.
Children's Hospital of Philadelphia · USChinese Academy of Medical Sciences & Peking Union Medical College · CNRutgers, The State University of New Jersey · USCapital Medical University · CN

Funding

Novel gene discovery in disorders of the liver and biliary treeK08DK128606 · NIDDK · CHILDREN'S HOSP OF PHILADELPHIA · PI Alanna Strong · 2022 to 2026
$821k
Functional Analysis of Whole Exome Sequence Variants Identified in Patients with Vertebral MalformationsR03HD099516 · NICHD · UNIVERSITY OF ILLINOIS AT CHICAGO · PI GIAMPIETRO, PHILIP F · 2020 to 2021
$247k
NICHD NIH HHS R03 HD099516NIDDK NIH HHS K08 DK128606
6 · The paper itself

Abstract

TBX6 encodes transcription-factor box 6, a transcription factor critical to paraxial mesoderm segmentation and somitogenesis during embryonic development. TBX6 haploinsufficiency is believed to drive the skeletal and kidney phenotypes associated with the 16p11.2 deletion syndrome. Heterozygous and biallelic variants in TBX6 are associated with vertebral and rib malformations (TBX6-associated congenital scoliosis) and spondylocostal dysostosis, and heterozygous TBX6 variants are associated with increased risk of genitourinary tract malformations. Combined skeletal and kidney phenotypes in individuals harboring heterozygous or biallelic TBX6 variants are rare. Here, we present seven individuals with vertebral and rib malformations and structural kidney differences associated with heterozygous TBX6 gene deletion in trans with a hypomorphic TBX6 allele or biallelic TBX6 variants. Our case series highlights the association between TBX6 and both skeletal and kidney disease.

Indexed as

OsteochondrodysplasiasScoliosisHumansKidney Tubules, ProximalPhenotypeSpineT-Box Domain ProteinsTranscription FactorsUrogenital AbnormalitiesT-Box Domain ProteinsTBX6 protein, humanTranscription Factorscongenital anomalies of the kidney and urinary tractcongenital scoliosiskidney dysplasiarib anomaliesTBX6vertebral segmentation defects

Identifiers

PMID36161696
PMCPMC10473889
OpenAlexW4297243444

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.