Evidence map›Paper›PMID 36161448›Full record

ArticleAngewandte Chemie (International ed. in English)2022

Cyanine Dye Coupling Mediates Self-assembly of a pH Sensitive Peptide into Novel 3D Architectures.

Rita Fernandes, Suvrat Chowdhary, Natalia Mikula, Noureldin Saleh, Katerina Kanevche, Hans V Berlepsch, Naoki Hosogi, Joachim Heberle, Marcus Weber, Christoph Böttcher and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Angewandte Chemie (International ed. in English), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 2 countries.

Rita FernandesDepartment of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 20, 14195, Berlin, Germany.
Suvrat ChowdharyDepartment of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 20, 14195, Berlin, Germany.
Natalia MikulaMathematics for Life and Materials Sciences, Zuse Institute Berlin, Takustraße 7, 14195, Berlin, Germany.
Noureldin SalehMathematics for Life and Materials Sciences, Zuse Institute Berlin, Takustraße 7, 14195, Berlin, Germany.
Katerina KanevcheDepartment of Physics, Experimental Molecular Biophysics, Freie Universität Berlin, Arnimallee 14, 14195, Berlin, Germany.
Hans V BerlepschResearch Center for Electron Microscopy and Core Facility BioSupraMol, Freie Universität Berlin, Fabeckstraße 36a, 14195, Berlin, Germany.
Naoki HosogiNakagami JEOL, Ltd, Akishima, Tokyo, 196, Japan.
Joachim HeberleDepartment of Physics, Experimental Molecular Biophysics, Freie Universität Berlin, Arnimallee 14, 14195, Berlin, Germany.
Marcus WeberMathematics for Life and Materials Sciences, Zuse Institute Berlin, Takustraße 7, 14195, Berlin, Germany.
Christoph BöttcherResearch Center for Electron Microscopy and Core Facility BioSupraMol, Freie Universität Berlin, Fabeckstraße 36a, 14195, Berlin, Germany.
Beate KokschDepartment of Chemistry and Biochemistry, Freie Universität Berlin, Arnimallee 20, 14195, Berlin, Germany.ORCID 0000-0002-9747-0740
Freie Universität Berlin · DEZuse Institute Berlin · DEJEOL (Japan) · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Synthetic multichromophore systems are of great importance in artificial light harvesting devices, organic optoelectronics, tumor imaging and therapy. Here, we introduce a promising strategy for the construction of self-assembled peptide templated dye stacks based on coupling of a de novo designed pH sensitive peptide with a cyanine dye Cy5 at its N-terminus. Microscopic techniques, in particular cryogenic TEM (cryo-TEM) and cryo-electron tomography technique (cryo-ET), reveal two types of highly ordered three-dimensional assembly structures on the micrometer scale. Unbranched compact layered rods are observed at pH 7.4 and two-dimensional membrane-like assemblies at pH 3.4, both species displaying spectral features of H-aggregates. Molecular dynamics simulations reveal that the coupling of Cy5 moieties promotes the formation of both ultrastructures, whereas the protonation states of acidic and basic amino acid side chains dictates their ultimate three-dimensional organization.

Indexed as

Coloring AgentsPeptidesCarbocyaninesHydrogen-Ion ConcentrationCarbocyaninesColoring Agentscyanine dye 5PeptidesChromophore AssemblyCyaninesDe Novo PeptideElectron MicroscopyH-Aggregates

Identifiers

PMID36161448
PMCPMC9828782
OpenAlexW4297106234

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.