Evidence map›Paper›PMID 36160259›Full record

ArticleFrontiers in microbiology2022

Impacts of soybean agriculture on the resistome of the Amazonian soil.

Oscar Cardenas Alegria, Marielle Pires Quaresma, Carlos Willian Dias Dantas, Elaine Maria Silva Guedes Lobato, Andressa de Oliveira Aragão, Sandro Patroca da Silva, Amanda Costa Barros da Silva, Ana Cecília Ribeiro Cruz, Rommel Thiago Jucá Ramos, Adriana Ribeiro Carneiro

Abstract read
In one paragraph

Article in Frontiers in microbiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Characterization of defensome genes and mobile genetic Elements in different types of pasture soil agroecosystems from the Brazilian Amazon.International microbiology : the official journal of the Spanish Society for Microbiology · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Oscar Cardenas AlegriaLaboratory of Genomic and Bioinformatics, Center of Genomics and System Biology, Institute of Biological Sciences, Federal University of Pará, Belém, Brazil.
Marielle Pires QuaresmaLaboratory of Genomic and Bioinformatics, Center of Genomics and System Biology, Institute of Biological Sciences, Federal University of Pará, Belém, Brazil.
Carlos Willian Dias DantasInstitute of Biological Sciences, Federal University of Minas Gerais, Belo Horizonte, Brazil.
Elaine Maria Silva Guedes LobatoDepartment of Soil Science, Federal Rural University of the Amazon, Paragominas, Brazil.
Andressa de Oliveira AragãoLaboratory of Genomic and Bioinformatics, Center of Genomics and System Biology, Institute of Biological Sciences, Federal University of Pará, Belém, Brazil.
Sandro Patroca da SilvaDepartment of Arbovirology and Hemorrhagic Fevers, Evandro Chagas Institute-IEC/SVS/MS, Ananindeua, Brazil.
Amanda Costa Barros da SilvaLaboratory of Genomic and Bioinformatics, Center of Genomics and System Biology, Institute of Biological Sciences, Federal University of Pará, Belém, Brazil.
Ana Cecília Ribeiro CruzDepartment of Arbovirology and Hemorrhagic Fevers, Evandro Chagas Institute-IEC/SVS/MS, Ananindeua, Brazil.
Rommel Thiago Jucá RamosLaboratory of Genomic and Bioinformatics, Center of Genomics and System Biology, Institute of Biological Sciences, Federal University of Pará, Belém, Brazil.
Adriana Ribeiro CarneiroLaboratory of Genomic and Bioinformatics, Center of Genomics and System Biology, Institute of Biological Sciences, Federal University of Pará, Belém, Brazil.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The soils of the Amazon are complex environments with different organisms cohabiting in continuous adaptation processes; this changes significantly when these environments are modified for the development of agricultural activities that alter the chemical, macro, and microbiological compositions. The metagenomic variations and the levels of the environmental impact of four different soil samples from the Amazon region were evaluated, emphasizing the resistome. Soil samples from the organic phase from the different forest, pasture, and transgenic soybean monocultures of 2-14 years old were collected in triplicate at each site. The samples were divided into two groups, and one group was pre-treated to obtain genetic material to perform sequencing for metagenomic analysis; another group carried out the chemical characterization of the soil, determining the pH, the content of cations, and heavy metals; these were carried out in addition to identifying with different databases the components of the microbiological communities, functional genes, antibiotic and biocide resistance genes. A greater diversity of antibiotic resistance genes was observed in the forest soil. In contrast, in monoculture soils, a large number of biocide resistance genes were evidenced, highlighting the diversity and abundance of crop soils, which showed better resistance to heavy metals than other compounds, with a possible dominance of resistance to iron due to the presence of the

Indexed as

Amazonia soilsantibiotic resistance genesbiocide resistance genesheavy metalsmetagenomic

Identifiers

PMID36160259
PMCPMC9500545

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.