Evidence map›Paper›PMID 36154664›Full record

Observational studyMicrobiology spectrum2022

Feasibility and Sensitivity of Saliva GeneXpert MTB/RIF Ultra for Tuberculosis Diagnosis in Adults in Uganda.

Patrick Byanyima, Sylvia Kaswabuli, Emmanuel Musisi, Catherine Nabakiibi, Josephine Zawedde, Ingvar Sanyu, Abdul Sessolo, Alfred Andama, William Worodria, Laurence Huang and 1 more

Open access · goldAbstract readObservational Study
In one paragraph

Observational study in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed, 2 pooled it
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 2 syntheses or guidelines pooled it, 27 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Closing gaps through innovation in the tuberculosis pathology value chain.Journal of clinical tuberculosis and other mycobacterial diseases · 2026
    Review
  4. Diagnostic Accuracy of Molecular Testing on Saliva and Oral Swabs for Pulmonary Tuberculosis.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2026
    Article
  5. Article
  6. Brief Report: Sex and HIV Modify Immune Activation Biomarkers in Ugandans Post-Tuberculosis.Journal of acquired immune deficiency syndromes (1999) · 2025
    Article
  7. Article
  8. Review
  9. Article
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  11. Review
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  17. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 3 countries.

Patrick ByanyimaInfectious Diseases Research Collaborationgrid.463352.5, Kampala, Uganda.
Sylvia KaswabuliInfectious Diseases Research Collaborationgrid.463352.5, Kampala, Uganda.
Emmanuel MusisiDivision of Infection and Global Health, School of Medicine, University of St. Andrews, United Kingdom.
Catherine NabakiibiInfectious Diseases Research Collaborationgrid.463352.5, Kampala, Uganda.
Josephine ZaweddeInfectious Diseases Research Collaborationgrid.463352.5, Kampala, Uganda.
Ingvar SanyuInfectious Diseases Research Collaborationgrid.463352.5, Kampala, Uganda.
Abdul SessoloInfectious Diseases Research Collaborationgrid.463352.5, Kampala, Uganda.
Alfred AndamaInfectious Diseases Research Collaborationgrid.463352.5, Kampala, Uganda.
William WorodriaInfectious Diseases Research Collaborationgrid.463352.5, Kampala, Uganda.
Laurence HuangDivision of Pulmonary and Critical Care Medicine, University of California San Francisco, San Francisco, California, USA.
J Lucian DavisDepartment of Epidemiology of Microbial Diseases, Yale School of Public Health, New Haven, Connecticut, USA.ORCID 0000-0002-8629-9992
Infectious Diseases Research Collaboration · UGUniversity of California, San Francisco · USUniversity of St Andrews · GBYale University · US

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Research Mentoring and Building Capacity of underrepresented Minority Research Scientists in India.D43TW010540 · FIC · YALE UNIVERSITY · PI MICHELE BARRY, Eva Harris · 2017 to 2026
$15.5M
Inflammation, Aging, Microbes, Obstructive Lung Disease and Diffusion Abnormalities (I AM OLD-DA) Study - Diversity SupplementR01HL128156 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HUANG, LAURENCE, HUNT, PETER W · 2015 to 2024
$7.1M
TB and Other Pulmonary Complications of AIDS Research Training ProgramD43TW009607 · FIC · YALE UNIVERSITY · PI DAVIS, JOHN LUCIAN, KATAMBA, ACHILLES · 2013 to 2022
$3.2M
Patient-Oriented Research and Mentoring in PneumocystisK24HL087713 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI HUANG, LAURENCE · 2006 to 2018
$1.8M
FIC NIH HHS D43 TW009607FIC NIH HHS D43 TW010540NCATS NIH HHS UL1 TR001863NHLBI NIH HHS K24 HL087713NHLBI NIH HHS R01 HL128156
6 · The paper itself

Abstract

The objective of this prospective observational study carried out at China-Uganda Friendship Hospital-Naguru in Kampala, Uganda, was to determine the performance of GeneXpert MTB/RIF Ultra (Xpert Ultra) molecular testing on saliva for active tuberculosis (TB) disease among consecutive adults undergoing TB diagnostic evaluation who were Xpert Ultra positive on sputum. We calculated sensitivity to determine TB diagnostic performance in comparison to a composite reference standard of Mycobacterium tuberculosis liquid and solid cultures on two spot sputum specimens. Xpert Ultra on a single saliva sample had a sensitivity of 90% (95% confidence interval [CI], 81 to 95%) relative to the composite sputum culture-based reference standard, similar to the composite sensitivity of 87% (95% CI, 77 to 94%) for fluorescence microscopy (FM) for acid-fast bacilli on two sputum smears. The sensitivity of salivary Xpert Ultra was 24% lower (95% CI for difference, 2 to 48%;

Indexed as

HIV InfectionsMycobacterium tuberculosisTuberculosis, Lymph NodeAdultFeasibility StudiesHumansRifampinSalivaSensitivity and SpecificityUgandaRifampindiagnosisfeasibilityHIV/AIDSnucleic acid amplification techniquessalivasensitivitytuberculosisUganda

Identifiers

PMID36154664
PMCPMC9603304
OpenAlexW4297239000

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.