Evidence map›Paper›PMID 36154437›Full record

ArticleMicrobiology spectrum2022

Single-Molecule Real-Time Sequencing to Explore the Mycobiome Diversity in Malt.

Nan Long, Jinxin Liu, Jiali Liu, Ying Li, Yujiao Hou, Xiaofang Liao, Lidong Zhou, Linchun Shi, Weijun Kong

Abstract read
In one paragraph

Article in Microbiology spectrum, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Nan Long *Institute of Medicinal Plant Developmentgrid.464346.7, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Jinxin Liu *Institute of Medicinal Plant Developmentgrid.464346.7, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Jiali LiuInstitute of Medicinal Plant Developmentgrid.464346.7, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Ying LiInstitute of Medicinal Plant Developmentgrid.464346.7, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Yujiao HouInstitute of Medicinal Plant Developmentgrid.464346.7, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Xiaofang LiaoInstitute of Medicinal Plant Developmentgrid.464346.7, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Lidong ZhouInstitute of Medicinal Plant Developmentgrid.464346.7, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Linchun ShiInstitute of Medicinal Plant Developmentgrid.464346.7, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.
Weijun KongInstitute of Medicinal Plant Developmentgrid.464346.7, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing, China.ORCID 0000-0001-9943-7218

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study determined the composition of fungal communities and characterized the enriched fungal species in raw and roasted malts via the third-generation PacBio-based full-length single-molecule real-time (SMRT) sequencing of the full-length amplicon of the internal transcribed spacer (ITS) region. In total, one kingdom, six phyla, 23 classes, 56 orders, 120 families, 188 genera, 333 species, and 780 operational taxonomic units (OTUs) were detected with satisfactory sequencing depth and sample size. Wickerhamomyces (56%), Cyberlindnera (15%), Dipodascus (12%), and Candida (6.1%) were characterized as the dominant genera in the raw malts, and Aspergillus (35%), Dipodascus (21%), Wickerhamomyces (11%), and Candida (3.5%) in the roasted malts. Aspergillus proliferans, Aspergillus penicillioides, and Wickerhamomyces anomalus represented the crucial biomarkers causing intergroup differences. Correlation analysis regarding environmental factors indicated that the water activity (a

Indexed as

MycobiomeMycotoxinsFungiHigh-Throughput Nucleotide SequencingHumansWaterMycotoxinsWaterfull-length ITSfungal communitymaltmycobiome diversitysingle-molecule real-time sequencingtoxigenic fungi

Identifiers

PMID36154437
PMCPMC9603040

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.